Castanea sativa (European chestnut): 142622709
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Entry
142622709 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142622709
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142622709
Enzymes [BR:
csaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
142622709
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
142622709
Prokaryotic type
142622709
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
New_glue
Motif
Other DBs
NCBI-GeneID:
142622709
NCBI-ProteinID:
XP_075652353
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All DBs
Position
1:complement(13569638..13572317)
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AA seq
512 aa
AA seq
DB search
MESPDSKTTISPPPPPPPQQEPEPKKLKMSTTTTSDDEDTTTTTTTTSPKKQRYKRRKIA
IFFAYCGVGYQGMQKNPGAKTIESDLEEALFLSGAVPEQDRNNPKRYDWARSARTDKGVS
AVGQVVSGRFYIDPPGLVERLNSNLSPQIRIFGFKRVTASFNAKKFCDRRRYVYLLPVFA
LDSSSHPDRESVLASVGSGNELVKCLECSERGRKVVGIMGKRSFEFKPVSPESGISSNSE
DARVESNVNNENRGSVENGDADKSNSESMEEPKVVDHKEVSEIVVETVSSDQNEGTDEKA
NGEEKGAKGSGFCYGEKERERFSGILMHYVGTHNFHNFTTRTKAEDPAAKRFIISFEANT
VVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIEKAFQKDVNINVPTAP
EVGLFLEECLFSSYNQKWKDTHEEVSMKAYEEEAEEFKMKQIYSHIASTEHKEGAVALWL
HSLNHRNYPDLRVDNNEDTSNGKSTEVVNMAE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcccagattcaaaaaccacaatatctcctccaccaccgccaccaccacaacaa
gaacccgaacccaaaaagcttaaaatgtccaccaccaccacttcggacgacgaagacact
accaccaccaccaccaccacaagccccaaaaagcaaagatacaagcgccgcaaaatcgcg
atcttcttcgcctactgtggcgtgggctaccaaggcatgcaaaagaacccaggtgccaaa
accatcgaatccgacctcgaagaagcgctcttcctctccggtgcggtgcccgaacaggat
cgaaacaacccgaaacgctacgactgggctcgctcggcccgaaccgataagggtgtcagc
gccgtgggtcaagtagtctcgggcaggttctatatcgacccgccgggtctcgtcgagcgg
ctcaattcgaatctctcccctcagattcggatctttgggttcaagcgggtgacggcgtcg
tttaatgccaagaagttttgcgatcgaaggaggtatgtgtatttgctacctgtgtttgcc
cttgattcctcttcgcatcctgatagagagagcgttttggctagtgtagggtctgggaat
gagcttgttaagtgtttagaatgctccgagagaggccgtaaggtcgtaggtataatgggt
aagcgtagttttgagtttaaacctgtgagtcctgagtcaggcatttcgtcgaacagtgag
gatgcaagagtagaatctaatgttaacaatgaaaataggggttctgttgaaaacggtgat
gctgataagtcaaattctgaatctatggaggaacctaaggttgtagatcacaaggaagtt
tctgaaattgtggttgaaaccgtaagttctgaccagaatgagggtactgatgaaaaagca
aatggagaggagaagggtgcaaagggaagtgggttttgttatggtgagaaggagagggag
aggtttagtggaattttgatgcattacgtggggactcataacttccataacttcaccacc
agaacgaaagctgaggaccctgctgcgaagcgctttatcatttcattcgaagcaaacact
gtggttacggttgagggcattgaatttgtcaagtgtgaggttgtgggacagagcttcatg
cttcatcagattcgtaaaatgattgggcttgcggtggctatcatgaggaattgtgctccg
gagtcattgatagaaaaagcttttcaaaaggatgtgaacattaatgtgcctacggctcct
gaggttggtttgttcttggaggaatgcctctttagctcatataaccagaagtggaaagac
actcatgaagaggtgtcaatgaaagcatatgaagaagaggcagaagaattcaaaatgaag
caaatctactctcatattgcatcaacagagcataaagagggagctgtggccctttggttg
cattctctgaaccatcggaattatccagatttacgcgttgacaacaatgaagacaccagt
aatgggaaaagtactgaagtagtgaacatggctgagtga
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