Castanea sativa (European chestnut): 142622739
Help
Entry
142622739 CDS
T11266
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
142622739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
csaa03011
]
142622739
Ribosome [BR:
csaa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
142622739
Bacteria
142622739
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLSB_S1
S1
RAB3A-like_C
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
142622739
NCBI-ProteinID:
XP_075652381
LinkDB
All DBs
Position
1:complement(35976693..35983805)
Genome browser
AA seq
541 aa
AA seq
DB search
MPLLFLLQPCKSLSSPNYSLPVNNVTFTIHNNKVFPFSFPFPFPSNPTKCPAPKPSKFQT
FSTVGSLIFSKNNFPICGGIHVAFCSRNEVFDGFSSIQLPQKPPSNSTNDDEELELLNKP
SPFPIDNYLDSESDKVSEKPDKDEALAPFLKFFKGGDSEEEMKEADEGGVLVLEEKSDVD
GRNEEGKKVDVEYYEPKPGDFVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEME
NLLCDTDKDANEVMVKGKMGIVKNDEALSGRQGLGRPVVEIGTVLFAEVLGRTLSGRPLL
STRRLFRRLAWHRVRQIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELLNRVNNFT
ELKENVGRRVYVQITRIDEAKNDLILSEREAWEMLNLREGTLLEGMVRKIFPYGAQIRIG
ESNRSGMLHISNITRARITSVSDLLAVDEKVKVLVVKSMFPDKISLSIADLESEPGLFIS
NKEKVFAEADAMARKYREKLPSGFAPHKSELPPTNALPFENEVKMYANWKWFKFEREYEP
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgccacttctttttcttcttcaaccctgtaagtctctttcttctcccaactattcttta
ccggttaacaatgtcactttcactatccacaacaacaaagtgtttccattttcatttcca
tttccatttccaagcaaccccactaaatgcccagctccaaaaccctccaagtttcaaacg
ttttccactgttgggtctctgatattttctaagaataatttcccaatttgtggaggtatc
catgttgccttttgctctaggaatgaggtttttgatggtttttcgagtatccagttgccc
caaaagcctccaagtaattctactaatgatgatgaagagcttgaattgctaaataagcct
tccccatttcctatagataattatttagactcggaatcagataaggtgtctgaaaaacct
gataaagatgaggctttagcgccttttttgaagttcttcaaggggggagattctgaggaa
gaaatgaaagaagcagatgagggaggtgtattagtattagaggaaaaaagtgatgtggat
ggtaggaatgaggaaggtaagaaggttgatgttgagtactatgagcccaaacctggtgat
tttgtggtgggggtggtggtttcaggtaatgagaataagcttgatgtgaatgtgggggca
gacttgttgggtacaatgttgacaaaggaggtgcttcccttgtatgacaaggaaatggaa
aacttgttatgtgatacggataaggatgccaatgaggttatggttaaggggaagatggga
attgtgaagaatgatgaggcattgagtgggagacaggggcttggaaggcctgttgttgag
attggaactgttttgtttgcagaggttcttgggagaacacttagtggtaggccattgctt
tctactagacggctgttccggcggcttgcctggcatcgagtgaggcagataaaacaactc
aatgaacccattgaggttagaataacagagtggaatactggaggccttctgacaagaatt
gagggattgcgagcttttcttcccaaagctgagttgttgaatagagtgaacaacttcact
gagttgaaagaaaatgttggacgccgggtatatgtgcagattactagaattgatgaggct
aaaaatgacttaatattgagtgagagggaagcttgggaaatgttaaaccttagagaggga
acacttctagaagggatggttagaaaaatcttcccgtatggagctcaaataaggataggc
gaaagtaacagaagtgggatgctgcatatctcaaacatcacccgtgcccgaattacttct
gtcagtgacttacttgcagttgatgagaaggttaaagttctggttgtgaagtcaatgttt
cctgacaaaatctctctcagtattgctgaccttgaaagtgagcctggcctatttatatca
aacaaagagaaagtatttgctgaggctgatgcaatggcaaggaagtacagggaaaagcta
ccttctggttttgcccctcataaatcggaactccctccaaccaatgctttaccctttgag
aatgaggtaaaaatgtatgcaaattggaagtggttcaaatttgaaagagaatatgaacca
gcgtga
DBGET
integrated database retrieval system
