Castanea sativa (European chestnut): 142622829
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Entry
142622829 CDS
T11266
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
KO
K03257
translation initiation factor 4A
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142622829
03012 Translation factors [BR:
csaa03012
]
142622829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142622829
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142622829
mRNA cycle factors
Stress granule specific factors
142622829
Translation factors [BR:
csaa03012
]
Eukaryotic type
Initiation factors
eIF-4
142622829
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142622829
Exosomal proteins of bladder cancer cells
142622829
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
DUF2780
Motif
Other DBs
NCBI-GeneID:
142622829
NCBI-ProteinID:
XP_075652498
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All DBs
Position
1:55431653..55436169
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AA seq
411 aa
AA seq
DB search
MAAPEGSQFDARQFDAKMDELLSADAQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEK
PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSVTECQALVLAPTRELAQ
QIEKVMRALGDYLGVRVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDY
IKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRIL
VKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSR
DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN
YLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccagaggggtcacaatttgatgctcgtcagtttgatgctaaaatggacgag
ttactttcagctgatgctcaggacttcttcacatcatatgatgaggtttatgaaagtttt
gatgctatgggattgcaagagaatcttctgagggggatttatgcttatggtttcgaaaaa
ccctctgctattcagcaaaggggaattgtacccttctgtaagggtcttgatgttattcaa
caagctcaatctggaactggaaagacagctactttctgctctggtgttttgcaacaactt
gactatagtgtgacggaatgccaagctttggtcctggcacccactagagagcttgctcaa
cagattgagaaggtgatgcgggcacttggagactatcttggtgtaagagtacatgcttgt
gttggtggaacaagtgttcgtgaagatcaacgcattctgtctagtggggttcatgttgtt
gttggcactcctggtcgtgtgtttgatatgctgcgaagacagtcacttcgtcctgattac
atcaagatgtttgtattggatgaggctgatgaaatgctttcccggggtttcaaggatcag
atctatgatattttccagcttctaccatcaaagattcaggttggggtattctctgccaca
atgccacctgaggcccttgagattactaggaagtttatgaacaaacctgttagaattctt
gtgaagcgtgatgagctcaccctggagggtataaaacagttttatgttaatgttgataag
gaggagtggaaacttgagacactctgtgatctttatgaaaccttggccatcacccagagt
gtcattttcgtgaacacgaggcgcaaggttgattggcttacagacaagatgcggagccgt
gaccacacagtctcagccacccatggtgatatggaccagaatacaagagacattatcatg
cgggaattccgttctggatcatctcgtgtccttataacaactgatcttttggcacgtggt
attgatgtccagcaggtctcccttgttattaattatgatctcccaacacagccagagaac
tatctgcatcgtattggacgtagtggacggtttggtaggaagggtgttgccatcaacttt
gtaacaaaggatgatgagaggatgctgtttgacatccagaagttctataatgttgtagtt
gaggagctgccatcaaatgttgctgatctcctctaa
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