Castanea sativa (European chestnut): 142623309 Help Entry 142623309         CDS       T11266                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism csaa  Castanea sativa (European chestnut) Pathway csaa03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:csaa00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     142623309  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csaa03019]     142623309 Enzymes [BR:csaa01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      142623309 Messenger RNA biogenesis [BR:csaa03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      142623309 SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA SRPRB AAA_22 Motif Other DBs NCBI-GeneID:  142623309 NCBI-ProteinID:  XP_075652824 LinkDB All DBs Position 1 Genome browser AA seq 443 aa AA seqDB search MAYSGGAMGAPVAAGPASSSTVRQFKLDKECELRIEVSDASPLRLRLLNGTAEIFGSELP PEIWLTFPPRLKFGVFTWYGATIETDGTTELVYTADETPMVSYVNVHAILEGRRNRAKAS PSNDSDSSQGPRVIVVGPTDSGKSSLSKMLLSWAAKQGWKPTYVDLDIGQGSITIPGCIG ATPIEMPIDPVEGIPLDMPLVYFFGQSTPSNNVDLYKVLVKELAKILERQFAGNAESRAA GMVINTMGWIEGLGYELLLHAIDTFNANVVLVLGQEKLWSMLRDVMKNNKPNVDVVKLQK SGGVVNRNAKFRQKARSYRIREYFYGLTNDLSPHSNTANFSDFFVYRIGGGPQAPRSALP IGAEPAADPTRLVLVSINPDLLHVVLAVSFAKEPDEIISSNVAGFIYITDIDMQRKKIIY LAPSAGDLPSKYLIVGNLTWLET NT seq 1332 nt NT seq  +upstreamnt  +downstreamnt atggcgtacagtggcggagccatgggtgcgccagtggcggcgggtccggcatcgtcgtcg acggtgaggcaattcaaattggacaaagagtgcgaactgagaatcgaagtcagtgacgcc tcgcctctccgtctccgcctccttaacggcacagccgagattttcggctccgagctccca ccggaaatctggctcacatttcctcccagactcaaattcggcgtttttacttggtatgga gccacgattgaaacggatggtactacagaacttgtttatactgcagacgagacacccatg gttagttatgtaaatgttcatgctattctggaagggcgaagaaatcgtgcaaaagcatcg ccatctaatgactctgattcatctcagggtcctagggtgattgttgtgggacctacagat tctggcaagagttccttatcaaagatgcttcttagttgggcagctaaacagggttggaaa cctacttatgtggacttggatattggacaaggatctattacaattcctggatgcatagga gccactccaattgaaatgccaattgatccagtggaaggaattcctcttgatatgcccctt gtctacttctttggacagtcaactcctagtaacaatgtagatttgtacaaagttcttgtg aaggagcttgctaaaatactggagagacagtttgctggcaatgccgaatctcgagctgca ggaatggtgatcaataccatgggatggatagaaggattaggctatgagttgcttctacat gcaattgatacattcaatgccaatgttgtcttggtcttgggtcaggaaaaactttggagc atgcttagagacgtcatgaagaacaacaagcctaatgttgatgttgtgaaacttcaaaag tcaggtggtgtcgttaacaggaatgccaagtttcgtcagaaggccaggagttataggata agggaatacttttacggccttaccaatgatctctctccacattctaatactgcaaatttt agcgacttttttgtctatcgaattggaggtgggccacaggccccacgttcagcactgcca attggggctgagccagctgcagacccaacaagattagtacttgtcagtatcaacccggat ttgctccatgtagttcttgctgtctcgtttgccaaagaacctgatgaaataatttcaagt aatgttgctggctttatctatatcacagacattgacatgcaaaggaaaaaaattatatac cttgcaccatcggcaggagatcttccaagcaaatatttgatagtgggaaacctgacatgg cttgaaacctga

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