KEGG   Castanea sativa (European chestnut): 142623431
Entry
142623431         CDS       T11266                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    142623431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csaa03036]
    142623431
Chromosome and associated proteins [BR:csaa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     142623431
    NSL complex
     142623431
   HMT complexes
    COMPASS/SET1 complex
     142623431
    COMPASS/SET1 complex (yeast)
     142623431
    MLL-HCF complex
     142623431
    MLL3/MLL4 complex
     142623431
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     142623431
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_HPS5 WD40_like eIF2A Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR75_2nd RMC1_N Beta-prop_Vps41 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_VPS8 VPS8_N PALB2_WD40 Beta-prop_WDR11_1st Beta-prop_LRRK2 WD_LRWD1 Beta-prop_IP5PC_F DUF5888 WDR54
Other DBs
NCBI-GeneID: 142623431
NCBI-ProteinID: XP_075652957
LinkDB
Position
2:39030711..39033370
AA seq 324 aa
MATETEPDQTESFKPYTLAKTLTPHKRAISAVKFSSDGRLLASSSADKTLRISVVKSSSD
SPAPTVSLLQELEGHEQGVSDLAFSSDSKYLVSASDDKTLRLWDIETGSLIKTLSGHTNY
AFCVNFNPQSNMIVSGSFDETVRIWDVKSAKCLKVLPAHSDPVTAVDFNRDGSLIVSSSY
DGLCRIWDAATGHCMKTLIDDENPPVSYVKFSPNAKFLLVGTLDNTLRLWNYATGKFLKT
YTGHVNSKYCLSSTFSVTNGKYIVSGSEDSCLYLWELQSRKIVQKLEGHTDTVISVSCHP
TENMIASGALGNDKTVRIWTQGKD
NT seq 975 nt   +upstreamnt  +downstreamnt
atggcgacagagacagagccagatcaaaccgaatccttcaaaccctacactctcgccaaa
accctaactccccacaagcgagcaatctccgccgtaaaattctcatccgacggtcgcctc
ctagcctcctcctccgccgacaaaaccctccgcatctccgtcgtcaaatcctcgtcggac
tcccccgctcccaccgtctctcttctccaagaactcgaaggccacgaacaaggcgtttcg
gacctagccttctcctccgactccaaatacctcgtctcggcctccgacgacaagaccctc
cgactctgggacatcgaaactgggtccctcatcaaaaccctgtcggggcacaccaactat
gctttctgtgtcaactttaatcctcagtccaacatgattgtctccggctctttcgacgaa
actgtccgaatctgggatgttaagtctgctaagtgtctcaaggtcttgccggctcactct
gaccccgtcaccgccgttgattttaaccgcgatgggtctctcattgtttcaagtagttac
gacgggttgtgtcgaatttgggacgctgcgactgggcattgtatgaagactttgattgac
gatgagaacccgccggtttcgtatgtcaaattctctcccaatgccaagtttcttcttgtt
ggaactcttgataatactttgaggctttggaactatgcaactgggaaatttttgaagact
tatactggccatgtgaattcgaagtactgcctttcatccacattttctgtaacaaatgga
aagtatattgttagcggttctgaagatagttgtctatacttgtgggagctgcagagcagg
aaaatagtccagaaattggaaggtcataccgacacggttatatcagtatcatgtcacccc
actgagaatatgattgcttctggtgcgcttggcaatgacaaaactgtgaggatttggact
caggggaaggattaa

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