KEGG   Castanea sativa (European chestnut): 142623642
Entry
142623642         CDS       T11266                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03020  RNA polymerase
csaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142623642
  09124 Replication and repair
   03420 Nucleotide excision repair
    142623642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csaa03021]
    142623642
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142623642
Transcription machinery [BR:csaa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     142623642
  RNA polymerase III system
   RNA polymerase III
     142623642
  RNA polymerase I system
   RNA polymerase I
     142623642
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      142623642
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 142623642
NCBI-ProteinID: XP_075653200
LinkDB
Position
2:50584825..50590047
AA seq 142 aa
MADEDYNDLDMGYEDEPPEPEIEEGAEEDLENNANEDAPVEIEGEEREEQEPVECPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggccgatgaagattacaatgatttggatatgggatatgaggatgagcccccagagcct
gagatcgaggaaggtgcagaggaggatttagagaacaatgccaatgaagatgctccggta
gagattgaaggtgaggagagagaagagcaggaaccagttgaatgtccgcgtaagacctca
aagtacatgacaaaatatgagcgtgccagaatattgggtacccgtgctctgcagatcagt
atgaatgcacctgtgatggtcgagttggagggtgaaactgacccacttgagattgcaatg
aaggagcttcgagagcggaaaatacctttcaccatccgccgctacctgccggatggaagt
tatgaagactggggagttgatgaactgattgtggaagactcatggaagaggcaagtgggt
ggcgattga

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