Castanea sativa (European chestnut): 142623918
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Entry
142623918 CDS
T11266
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142623918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142623918
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142623918
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
142623918
NCBI-ProteinID:
XP_075653514
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Position
2:complement(54829270..54839119)
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AA seq
747 aa
AA seq
DB search
MFDCGYKSQYIGGQTEKFVRLDDLDSTLSMPSGAVGKKRAIFNLEGLNLTGHAKKNSSKS
FRYGMKVGSDGLKTIGRSLRSGVTRAVFPEDLKVSEKKIFDPQDKSLLLWNRLFVISCIL
AVSIDPLFFYLPVFNHASNCLGMDTKLAVTTTTLRTILDSFYLIRMALQFRTAYIAPSSR
VFGRGELVIDPTQIAKRYLQRYFLVDLLSVLPLPQIVVWKFLQRSKGSEVLATKQALLHI
VLFQYVPRFARFFPLNAELKKTAGVFAESALVGAAYYLLWYILSSHITGAFWYLFAVERN
DTCWRQACKDSGKCDINYLYCGNKHMEGYSNWEKISKGVLGSRCSIVDEDSQFNYGIYTN
AISSGIVASRTFFSKFCYCLWWGLQNLSTLGQGLETSTYPGEVLFSILIAISGLLLFALL
IGNMQTYLQSLTVRVEEMRIKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEES
LVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTERTYIVREGDP
VDEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTV
KALTEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYLKR
RAAERHRQEEAEEEEEEEALHYGKEYDDVRALVSRSDSTSRLGATILASRFAANALRGHR
LRNPSAGGLVKLQKPPEPDFTNYDSEK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgcggttacaagtcccagtacattggtggccagacggagaaatttgtaagg
ttggatgatcttgattctacattgtcaatgccttctggtgctgttggaaagaagcgagct
atatttaatttagaggggctaaaccttactggtcatgcaaagaaaaattcatcaaaatcc
tttaggtatggaatgaaagtgggatcagatggactaaagacaattgggcgatcactcagg
tctggcgtcacccgggcagtgttcccagaagatcttaaagtatctgagaaaaaaatattt
gaccctcaagataaatccctcttgttatggaataggctttttgtcatatcttgtattctt
gcagtttctattgatccattgtttttctatcttcctgtcttcaatcatgcatcaaattgc
cttggcatggatacaaagttggcagtcacaacaactactctgcggacaattcttgattct
ttctatcttattcgtatggctcttcagttccgcacagcgtatattgctccatcttctcgg
gtttttggacgaggtgagcttgtgatagatcctacacagatagccaagcgatatctacaa
cgttatttccttgtggatttactgtctgtgcttcctctacctcagattgtagtgtggaaa
ttcctccagagatcaaagggctcagaagtattggctacaaaacaagcattactacatatt
gtcttgtttcaatatgttccaagatttgcccgcttttttcctttgaatgctgaacttaaa
aagactgcgggtgtttttgctgaaagtgctttggttggtgctgcgtactatttgctttgg
tatatactttccagccatataaccggggctttttggtacttatttgctgttgaacgaaat
gacacttgctggcggcaagcctgtaaggatagtggaaaatgtgacataaactacttgtac
tgtgggaataagcatatggaaggttacagtaattgggaaaagatcagtaagggtgttctt
ggcagtcgttgctctattgttgatgaagattcacaattcaactatggaatttacacaaat
gctatatcgtctggcattgttgcatctaggacttttttctctaaattttgctactgttta
tggtggggcctgcaaaatttgagtacacttggtcaagggcttgaaaccagtacctaccct
ggagaggttctgttttccatactaatagcaatttctgggctcctactctttgcacttctg
attggaaatatgcagacatacctccagtctcttacagttcgtgttgaagagatgagaatc
aaaaggcgtgattctgaacagtggatgcatcaccgcttacttccacaggatctgagggaa
agagttagacgctatgaccagtataagtggttagaaacacgaggagtagatgaagagagc
ttggtccagagtttaccaaaagatctcaggagggatatcaaacgacatctttgtttgaat
ttggtgagaagggttcctttgtttgccaatatggatgagaggttacttgatgccatctgt
gagagattgaagcccagtttatacactgagagaacctacattgttcgggaaggggacccg
gtggatgagatgctctttatcattcgtgggcgcctggagagtgtcactacagatggtgga
aggagtggatttttcaaccgaggtctactgaaagaaggggacttctgtggagaggagctt
ctaacttgggcactggaccctaaagctggttccaacttaccatcatcaactcggacagtg
aaggctttaactgaagtggaagcctttgccttggaagcagaagagttgaagtttgttgcc
agtcagtttaggcgccttcatagtaggcaagttcagcacaccttccgcttctactcacag
cagtggaggacctgggctgcctgctttatccaggctgcttggagacggtatctcaagagg
agagctgcagaacgtcatcgtcaagaagaggcagaagaagaagaagaggaggaagcatta
cactatggtaaagaatatgatgatgtaagggcattagtttctcgaagtgatagtacttct
aggcttggtgcaactatcttagcatcccgatttgcagctaatgcccttcgtggtcatagg
cttcggaacccaagtgctggaggcttggtgaaactgcagaagcccccagaacccgatttc
acaaattatgattcagagaagtag
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