Castanea sativa (European chestnut): 142623985 Help Entry 142623985         CDS       T11266                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism csaa  Castanea sativa (European chestnut) Pathway csaa04142   Lysosome biogenesis csaa04145   Phagocytosis csaa04148   Efferocytosis Brite KEGG Orthology (KO) [BR:csaa00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     142623985    04142 Lysosome biogenesis     142623985    04148 Efferocytosis     142623985  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csaa04131]     142623985 Membrane trafficking [BR:csaa04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     142623985 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_19 AlaDh_PNT_N zf-HC5HC2H TPR_WDR35 ANAPC3 Motif Other DBs NCBI-GeneID:  142623985 NCBI-ProteinID:  XP_075653587 LinkDB All DBs Position 2 Genome browser AA seq 1008 aa AA seqDB search MVHSAYDSFQLLSDCPTKIDAVESFGSKLLLGCSDGSLKIYGPDPSGSDRSPPSDYLSQA QDLRREPYVLERNVAGFSRRPLISMEVLESRELLLSLSESIAFHRLPSLETNAVITKAKG ANVYSWDDRRGFLCFARQKKVCIFRHDGGRGFVDMKEYGVPDVVKSMSWCGENICLGIRK EYMILNATNGALSEVFPSGRLAPPLVISLPSGELLLGKENIGVFVDQNGKLLHEGRVCWS EAPAQVVIQNPYGIALLPRYVEIRSLRDPYPLIQTVVLRNARHLCQSNNAVIVALENSVY GLFPVPVGAQIVQLTASGNFDEALALCKLLPPEDASLRAAKEGSIHIRYAHCLFDNGSYE EAMEHFLASQIDITYVLSLYPSIILPKTTLIPEPERLMDISLDASYLSRGSSGLSDDMEI SPLPQLLESDENAALESKKMSHNTLMALIKFLQKKRYSVIEKATAEGTEEVVLDVVGDNF ASYDSSRFKKSTKGRGNISIGSGAREMAAILDTALLQALLLTGQSSAVLELLKGLNYCDM KICEEILQKGNHYAALLELYKCNSMHREAFKLLYQLIEESKSNQSIAELTQQFKPESIIE YLKPLCGTDPMLVLECSMLVLESCPTQTIELYLSGNIPADLVNSYLKQHAPSMQAKYLEL MLAMNENGISGNLQNEMVQIYLSEVLDWYADLSAQEQWDEKAYSSTRKKLLSALESISGY NPEALLKRLPPEALYEERAHLLGKMNQHELALSLYVHKLHVPELALAYCDRVYESVVHQP SVKSSGNIYLTLLQIYLNPRRTTKNFEKRITNIVSPLNTSIPKVLPGTSVKAKVGRANKK IASIEGAEDMRISQSSTDSSRSDGDVDESSEEGGSTIMLDEILDLLSRRWDRLNGAQALK LLPRETKLQNLLPFLGPLLRKSSEAYRNLSVIKSLRQSESLQVKDELYNQRKTVVKITGD SLCSLCNKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSPLRRR NT seq 3027 nt NT seq  +upstreamnt  +downstreamnt atggtacatagtgcctacgattccttccagctcctcagcgattgccccaccaaaatcgat gccgtcgaatcgttcggctcaaagctactcctcggctgctccgatggatcccttaaaatc tacggcccagacccctccggctccgaccgctctccaccgtccgattacctctctcaggcc caagatctgcgtagggagccgtacgtactggagagaaacgtggctgggttctcgagaagg cctctaatctcaatggaagtgttggagtcgagagagctccttctatcgctctcggaatcg atcgctttccataggctcccaagtttggagaccaacgctgtgatcaccaaagccaagggc gccaatgtgtattcttgggacgatcggagaggctttttgtgttttgcgaggcaaaagaaa gtctgtattttcagacatgacgggggtcggggatttgtggacatgaaagaatatggtgtt ccggatgtggtgaagtcaatgtcttggtgtggtgagaatatatgtttgggtatcagaaaa gaatacatgatactgaatgctacaaatggtgcgttgtctgaagtgtttccttctgggagg ctagccccgcctttagtgatttctcttccttcaggggagcttcttcttgggaaggagaac attggtgtctttgtggaccaaaatggaaagcttcttcatgaaggtagggtttgttggtca gaggcccctgctcaagttgtcattcagaacccatacggaatagctttattaccaagatat gttgagattcggtctcttcgagatccttatccactcatacagactgttgttctcagaaat gctcgtcatctttgccaaagcaacaatgctgtcattgttgcactggaaaattctgtttat gggctcttcccagttcctgttggtgcacagattgtacaattaacggcatctggcaatttt gatgaagctttggccttgtgtaagctgcttccaccagaagatgcaagccttagagctgca aaggagggttcaattcatataagatatgctcactgcctctttgataatggaagctatgag gaagccatggagcattttttggcatctcaaatagatataacctatgtactttctttgtat ccatctattatccttcctaaaacaactctaattcctgagccagagaggcttatggacatc tctttggatgcttcatatctctcaagaggttcatctggtttatcagatgatatggaaatc tcaccattaccacagctattggaatctgatgagaatgcagcacttgagtcaaagaaaatg agccataatactctcatggctcttattaagtttttacagaagaagagatacagtgtaatt gaaaaggccactgcggagggaacagaagaggttgttttagatgttgttggagataatttt gcctcatatgactctagtaggttcaagaaatcaaccaaggggcgtggcaatatttccatt ggctctggtgctcgggagatggcagcaatacttgacacagcactactccaagctctgctt cttactggacagtcttcagcagttttagaattactgaaaggtctcaattactgtgatatg aaaatatgtgaggaaattcttcagaaagggaatcattatgctgctttgttagaactttac aagtgcaattcaatgcaccgtgaagcttttaaacttctttatcaattgatagaagagtca aaatcaaaccaatcaatagctgaacttacccagcagtttaagcctgagtcaattattgaa tatctcaagcctctgtgtgggactgatcccatgcttgttctggagtgctcaatgcttgtt cttgaaagctgtccaacacaaactattgagttgtatttgtctggaaatattccagcggac ttggtcaactcttatttgaagcaacatgctccaagcatgcaggccaagtacttagaactc atgcttgcaatgaatgagaatgggatctcaggaaatctgcagaacgaaatggtgcaaata tatctctcggaagtacttgattggtatgcagatttaagtgctcaagagcaatgggatgag aaagcttattcctcaacaaggaagaagctgttgtctgctttagagagtatctctggatat aacccagaggctttgttgaaacgtcttcctccagaagctttatatgaagagcgtgcacat ttgttgggtaaaatgaaccaacatgagcttgccttatctctttatgttcataagcttcat gttcctgagctggcactggcctattgtgatcgggtatatgagtctgtagttcaccaacca tctgtaaaatcttctggcaatatatacctcactcttctgcaaatttatctgaatcctcgg aggacaaccaagaactttgaaaagcgaattacaaatatagtatcacctctgaatacaagc attccaaaggttcttccagggacttcagttaaagctaaagtagggcgtgcaaataagaaa attgcttctatagagggtgcagaggacatgcgaatcagtcagagcagtactgacagtagt aggagtgatggtgatgtggatgaatctagtgaggaaggaggatctactattatgcttgat gagatccttgatctgttgagccgaagatgggataggctaaacggagctcaagcactcaaa cttttaccaagggaaaccaaactacagaacttgcttccatttcttggacctcttctgcga aaatccagtgaagcttacagaaatctttcagtaatcaaaagtttgagacagagtgagagc ctgcaggtgaaggatgagctctacaaccaaaggaagacggtggtgaagatcactggtgat agtttgtgctctctttgcaataagaagatagggacaagtgtttttgcagtctaccccaat gggaagacacttgtgcactttgtttgctttagagactcgcagagtatgaaagccgtggcc aaaggctccccgctaaggaggcgatga

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