Castanea sativa (European chestnut): 142624043
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Entry
142624043 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142624043 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142624043
Enzymes [BR:
csaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
142624043
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
142624043
Prokaryotic type
142624043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
142624043
NCBI-ProteinID:
XP_075653657
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All DBs
Position
2:15332360..15335141
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AA seq
347 aa
AA seq
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MSYAAVVVGSAFVPSLPLYPNATPNPNGSLPSPNNTSQNTGGVGCGGAEDPTQNTMKPTV
AASSGFKWRLVIAYDGTRYSGWQYQQSPPTIQCIVEKALTQETKLERKDLLLVGASRTDK
GVHALGQVAHFVTPFNYDSLESIHAALNGLLPSDIRVQEISPAMPEFHARFSAKRKIYHY
KIYNDTIMDPFQHRYAYHSAYKLNAAVMREAASYFIGKHDFSAFVNASHNDRVRDPVKNI
FRFDVIEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPMILASRDRKELAK
YALSAPPHGLCLVTVNYNEEHLGLPSGCPKTSFGRHHTISKCKLPFY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgctgcggttgtggtagggtcagcctttgttccttctcttcctctttatcct
aatgctactccaaatccaaatgggtctcttccttcacccaataatacttcgcagaacacg
ggtggtgttggttgtggtggtgcagaggaccctacccagaatactatgaagccaacagtt
gctgcttcttctggttttaagtggcgtttggttatagcatatgatggcacccgttattca
ggttggcaatatcagcagtcaccaccaaccatacagtgcattgtggaaaaagctttaact
caagaaacaaagctagaaaggaaggatctccttttggttggtgcgagcaggacagataag
ggagttcatgccttgggtcaggttgcacactttgttacacctttcaactatgacagcttg
gaaagcattcacgcagctctgaatggtcttcttccctctgatatccgtgttcaagagatt
agccctgcgatgcccgaattccacgctcgattctcagcgaaaagaaagatttatcattac
aagatatataatgacaccataatggacccatttcagcatcgctatgcttatcacagtgcc
tataaacttaatgctgcagtcatgagagaagctgcaagttatttcattggaaagcatgac
ttctctgcttttgtcaatgcatcccacaatgatcgagtgcgagatccagtgaagaatata
ttccgttttgatgtcattgaaatgggagctcttttgcagctagaagttgaaggttcaggt
ttcttatatagacaagtgcgaaacatggttgccctgcttcttcaaattggaaaggaagca
attccacctgatattgttcccatgattttggcaagtcgagatcgcaaggagctggctaag
tatgctttgtctgccccacctcatgggctgtgtcttgtaactgtaaactataatgaagag
cacctagggcttccatcaggttgccccaaaaccagttttggtaggcatcatactataagc
aaatgtaagcttccattttactga
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