Castanea sativa (European chestnut): 142624433
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Entry
142624433 CDS
T11266
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03440
Homologous recombination
csaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142624433
03460 Fanconi anemia pathway
142624433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csaa03032
]
142624433
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142624433
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
142624433
DNA replication proteins [BR:
csaa03032
]
Eukaryotic type
DNA Topoisomerases
142624433
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
142624433
FA (Fanconi anemia) pathway
142624433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
142624433
NCBI-ProteinID:
XP_075654112
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All DBs
Position
2:complement(29488589..29563358)
Genome browser
AA seq
863 aa
AA seq
DB search
MAPPKVLMVAEKPSIAVSIATQLSHGQMSTRRGSTDVHEFEGMFLGSHAQFKVTSVIGHV
FSVDFPATYQNWTATDPLDLFQAQITKTESNPKAHICRHLSQEARSCGYLVLWLDCDREG
ENICFEVIDCTGFDTREARRRVYRARFSSVTEKDILKAMDNLVEPNEDEALAVDARQEID
LKVGVAFTRFQTTYFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQITTFKPEKFWALRP
YMIQNGYELQLEWERDKLFDLDVATLFQKLIMEDGILEVTEISEKQESKSRPAGLNTVNL
LKVASSGMGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLGALANNTIWGND
VQRLLANGYHKPRLGSDAGDHPPITPMQSATEDMLDKDAWRLYQYVCQHFIGTVSPDCKY
LRTKVKFSIGGECFHCTGQHVIDEGFTSIMPWLAVTERNLPRFTKGEKIEASKVELYEGS
TMPPECLSESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTSLGITLIRG
YQCIDPDLCLPDIRSFIEQQITLVAKGQMDHFRVVQHVLQQFKQKFTYFVKQIENMDALF
EAQFSPLADSGRALSKCGKCLRYMKYISMQPSRLYCGTCEEVYYLPQNGTIKLYKELSCP
LDNFELLILSMPGPEGKSFPLCPYCYNSPPFEGVDTLFGAVKTGNSGKLGKGAGMPCFLC
PHPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLNCNMCNCLVFLPQGAHKISTTQER
CPDCDSKIIEVDFNKKTTPLEDGATIYVGCILCDELLHSLVEMKHGKSFYKRMGSRGRGR
GAGRGRGRSSGKRVDPKMSFRDF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctaaagttctcatggtggctgagaagcccagcatcgctgtttccattgct
acccaactctcccatggccaaatgtctactagaaggggtagcacagatgtgcatgaattc
gagggaatgtttctcggctctcacgctcaatttaaagtcacctcagtcattgggcatgtg
ttcagtgtagattttccagcaacatatcaaaattggacagccaccgaccctttggatctt
ttccaagctcaaattactaagacagaatcaaaccctaaggctcatatttgtaggcattta
agtcaagaagctcgcagctgtggctatttggtgttatggttggattgtgaccgtgaagga
gaaaatatttgctttgaagttattgattgcactggctttgatacgagggaagctagaaga
agggtatatcgtgcgcggttctcttctgttacagaaaaagacattttgaaggctatggat
aaccttgttgaacccaatgaagatgaggcactagctgtagatgctcggcaagagatagat
ttgaaagttggagttgcattcacgcgatttcaaactacttatttccagggaaaatatggg
aatcttgatgctagagtcatatcctacggaccatgtcagactcctacacttgggttttgt
gtacagcgttatttgcaaataactacttttaagccagagaaattttgggctttgcgacct
tacatgatacaaaatggttatgaacttcagctagaatgggagcgtgacaagttgttcgac
ttagatgttgctacgttgtttcaaaagttaataatggaagatggaattttagaagttact
gaaatatcagaaaaacaggaaagcaaaagtcggcctgctggtcttaatacagtgaatctt
ctgaaggttgcttcaagtggcatgggctttggacctcaaatggctatgcaactggctgaa
cgcttgtatactcaaggatttataagttatccacgcacagagagcacagcctatccttct
tcatttgacttcagaggcacacttggtgcactagcaaataacacgatatggggcaatgat
gtacagagattgcttgccaatgggtatcataaaccgcgattaggatctgatgcaggtgac
catcctcctattaccccaatgcagtccgcaactgaggatatgctggacaaagatgcttgg
agactgtaccagtatgtctgtcaacactttataggaactgtctctcctgactgcaagtat
ttaaggacaaaggtcaaattttcaattggtggagaatgcttccattgcactgggcagcac
gttatagatgaaggatttacatctattatgccatggttggcagtaactgagagaaatctt
cctcggtttacaaaaggagagaagatagaagcttcaaaagtggagctatacgaggggagt
accatgcctccagaatgtcttagtgagagtgaactgatttccctgatggagaagaatgga
ataggcacagatgcttcaatacctgtgcatattaacaacatatgtgagcgcaactatgtg
caggtacaagctggcaggaagttggttccaaccagcctgggtatcaccctgataagaggc
tatcaatgtattgatccagatctctgtttgccagatattcgaagtttcattgagcaacag
attactcttgttgctaaaggtcaaatggatcattttcgtgttgtgcagcatgtcctacaa
cagtttaaacaaaagttcacttattttgttaagcagattgaaaatatggatgcattgttt
gaagcacagttttctccacttgctgactcaggacgtgctcttagtaagtgcggtaaatgc
ctgcggtacatgaaatacatctccatgcaaccatcacgtctgtactgtggtacatgtgag
gaggtttactatcttcctcaaaatggtaccatcaagttatacaaggaactttcttgccct
ttagacaactttgagcttctgatcctttccatgcctggcccagaaggcaagtcattccca
ctctgcccatactgctacaatagccctccatttgaaggtgtggacacactctttggtgct
gttaaaaccggtaattctggcaaattggggaagggagctggaatgccctgcttcctctgc
ccacaccccacgtgccgacattcactgattgcccaaggagtatgtgcttgtccagaatgt
agtgggacacttgttctagaccctgtaagtgctccaaagtggagacttaattgcaatatg
tgcaattgccttgtcttcctccctcaaggtgctcacaagatttccactactcaggagcga
tgtcctgattgtgactctaaaatcatagaagttgacttcaacaagaagacaacacctttg
gaggatggagctaccatatatgttggttgcattctttgcgatgagttgcttcattcactt
gtggagatgaagcatggcaaatcattttacaagcgcatgggttcaagaggaagggggaga
ggagctggaagaggacgaggacggagtagcgggaaaagggtggaccccaaaatgagtttc
cgagatttctga
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