Castanea sativa (European chestnut): 142624489
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Entry
142624489 CDS
T11266
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142624489
Spliceosome [BR:
csaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142624489
SSDB
Ortholog
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_ACIN1
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
142624489
NCBI-ProteinID:
XP_075654179
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All DBs
Position
2:31690426..31696918
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AA seq
448 aa
AA seq
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MTDPSKVLHIRNVGYEITENDLLQLVQPFGVVTKSVMLRAKNQALIQMQDVASAVTVVQY
YTNVQPCVRERNVYIQFSSHQELTTVDQNTQGRSQDAQPNRILLVTIHQMQYPITVEVLH
QVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSALSAIDALQGRNIYDGCCQLDIQFSNLS
ELQVNYNNERSRDFTNPALPSEQKGRSSQSGYGDMGGMYGLQPPGARAVAYPQMGDAAAI
AAAFGGRLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRSKPDHAL
IQMGDGFQAEFAVNFLKGALLFGKRLEVNYSKYPNITPGQDTHDYSNSNLNRFNRNAQKN
YRYCCSPTKMIHLSTLPQEITEEEIVAQLELEEHGTVVGTKLFEANGKKQALVLFETEEQ
ATEALVCKHATSIDGSIVRISFSQLQSL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccttcaaaagttcttcatattcgaaatgtgggttatgaaataaccgagaat
gatttgctccaactggttcagccatttggggttgtcactaaatcagtgatgctacgtgct
aagaaccaggctcttatccagatgcaggatgtagcatctgctgtcactgtagtgcaatac
tacacgaatgttcagccttgtgttcgggagagaaatgtttacattcagttctcttcacat
caagaactgactacagtggatcagaacactcaaggacgcagccaggatgcgcagcctaat
cgaattctcttagttacaattcatcaaatgcaatatccaataacagtggaagtgcttcac
caagtgttttctccttatggttttgtggagaagattgtcacatttcagaagtcagctggt
tttcaagcccttatccagtatcagtcacgccagagcgctctttctgccatagatgcactt
cagggacgaaatatatatgatggctgttgtcagctagatattcagttttcaaacctttct
gagctacaagtgaactacaataatgagcgctccagggatttcacaaacccagctctacct
tcagaacaaaaaggcagatcctcacaatctggatatggtgatatggggggcatgtatggt
cttcaacctcctggagctagagcagtagcatatccacagatgggagatgctgcagccatc
gcagctgcctttggtgggcgcctgcctcctggtataagtggcacaaatgataggtgcact
gtcttggtgtctaatctaaatcctgataaaattgatgaggacaagttattcaatctattt
tccctctatggaaacattgtgaggatcaagcttcttcgtagtaaaccggaccatgccctc
attcaaatgggagatggattccaggccgagtttgctgtaaacttcttgaagggagcattg
ctatttgggaaacgtttggaagtaaactactccaagtatccgaacataacgccaggccag
gacactcatgattactcgaattcaaaccttaaccgctttaatcgtaatgctcagaagaac
taccgttattgctgttcaccaacgaagatgatccacttgtccaccctccctcaggaaatt
acagaggaagaaatagtggcccagctggagctggaggagcatgggaccgttgtaggcacc
aaactctttgaggcaaatgggaagaagcaagccttagtcctgttcgagactgaagagcaa
gctactgaggcacttgtctgcaagcatgcaacttccattgatggatcaattgtccgaatc
tccttctcccaattgcagtccctttag
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