Castanea sativa (European chestnut): 142624539
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Entry
142624539 CDS
T11266
Name
(RefSeq) cryptochrome-1
KO
K12119
cryptochrome 2
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
142624539
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
142624539
NCBI-ProteinID:
XP_075654249
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Position
2:complement(19285202..19291932)
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AA seq
665 aa
AA seq
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MGSVKTIVWFRRDLRIEDNPALAAAAKDGSVFPVYIWCPKEEGHFYPGRVSRWWLKQSLA
HFEHSLKSLGAELMLIKTDSILATLVECINAVGATKVVFNHLYDPVSLVRDHNIKEKLVE
LGISVQSYNGDLLYEPWDVYDESGHAFTTFEAYWNKCLHLQMEPVSPFPPWKLVPASGTV
KNCSVEELGLEDELEKSSNALLGRAWFPGWSNADKALTEFVEQHLLDYSNNRQKVGGNST
SLLSPYLHYGELSVRKVFQYVRMKQILWAKEGNSLGEESINLFLRAIGLREYSRYLCFNF
PFTHERSLLSNLKFFPWNADQANFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVVVSS
FAVKVLLLPWRWGMKYFWDTLLDADLESDILGWQYISGGLPDGHELQRLDSPEIQGSKFD
PEGEYVRHWMPELARMPTEWIHHPWDAPLSVLKASGVELGFNYPKPIIEIDLARERLIEA
IFKMWEMDAASRDANSDVMNEVVVDNSDGTKNLAIAKVVENSGGTENSSIPKVLLKERIP
CPTISSNDQKVPTVQNSKHYPFYRKRSKYMEGEKPLPDDLHKHNNEAGTSRTDEDLRSTA
ESSSIKKQTTSRNTFSVPQLSYSSEDNFFPVYDSSDLKQPWQEQINMQQSSNKEGTFGGS
WPSHS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcgttaagaccatagtttggtttaggagggacctcagaattgaggacaatcct
gctttagctgcagctgctaaggatggttctgttttccctgtctatatatggtgcccaaaa
gaggaagggcatttttatccaggtcgggtttcgaggtggtggctgaagcaatctcttgcc
cacttcgaacattccctgaagtctcttggcgctgaacttatgctcatcaagactgacagt
attcttgccactcttgtggagtgcatcaatgctgttggggcaacaaaagtagtcttcaac
catctttatgatcctgtttcactcgttcgagatcacaatatcaaagaaaaactggtggag
ctaggaatttctgtgcaaagctataatggtgatttgttgtacgagccatgggatgtctat
gatgagagtggacatgcttttacaacctttgaggcatattggaataaatgcttgcacttg
caaatggaacctgtttcaccttttcctccatggaaattagtgccagcttcaggaactgtt
aagaattgttcagttgaggaattgggtcttgaagatgaattggaaaaatctagcaatgca
ttattaggaagagcatggtttccaggttggagcaatgctgataaggctctaactgaattt
gttgagcagcatttgctggactattcaaataataggcaaaaggttggggggaactccaca
tcacttttgtccccatatcttcattatggagaactaagtgtacggaaagttttccaatat
gtgcgaatgaaacagattttgtgggcgaaagaaggaaactctttgggtgaagaaagtata
aatcttttcctcagagccatcgggcttagagaatactcccgttatctttgtttcaacttc
ccgttcactcatgagagatcattattgagtaacttgaaatttttcccttggaatgctgac
caagccaattttaaggcttggagacagggtcggactggctacccattagttgatgcagga
atgagagaactttgggcaactgggtggatacacaatcgaataagagtggttgtttcaagt
tttgcagtaaaagttttacttcttccatggagatgggggatgaagtatttctgggacaca
cttttggatgcagacttagagagtgacatccttggttggcaatatatctcagggggctta
ccagatggtcatgagcttcagcgactggacagcccagagattcaaggctccaaattcgat
ccggagggtgaatacgtgaggcattggatgcctgagctagcacggatgccaactgagtgg
attcatcacccttgggatgcacccctttctgtgctcaaagcttcaggggtagagttggga
tttaactatccaaaacctataattgagatagatttggccagagaacgtttgattgaagct
attttcaagatgtgggaaatggatgcagctagtagggatgcaaactcggatgtcatgaat
gaagttgttgttgacaattctgatggtactaaaaatttggctattgcaaaagtcgttgaa
aattcaggtggtactgaaaattcttccattccaaaggttctcttaaaggaaaggattccg
tgtcctactatttcatcaaatgatcagaaggtgcccacagttcaaaattctaagcattat
ccattctataggaagagatctaaatatatggaaggggaaaagccactcccagatgatttg
cataagcataacaatgaagcagggacatcaagaacagatgaagacttacgctctacggct
gaatcttcgtcaattaagaagcagaccaccagcagaaacaccttttctgttcctcagttg
tcttattcatcagaagacaatttttttccagtgtatgactcttctgacctaaagcagcca
tggcaagaacagattaacatgcagcagagttcaaacaaagaaggaacttttggaggttca
tggccttctcattcataa
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