Castanea sativa (European chestnut): 142624558
Help
Entry
142624558 CDS
T11266
Name
(RefSeq) calmodulin-binding transcription activator 3-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142624558
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Other transcription factors
Others
142624558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
IQ
Ank_4
Ank
TIG
Ank_3
TIG_plexin
Motif
Other DBs
NCBI-GeneID:
142624558
NCBI-ProteinID:
XP_075654279
LinkDB
All DBs
Position
2:complement(50790545..50810686)
Genome browser
AA seq
1196 aa
AA seq
DB search
MTKGRHSGLGNQLINANQIVTEAQKRWLHTAEICGILHNYKNFPLAAKPANMPPSGSFFL
FNRKELRCFRKDGYNWTKKKRDGKTVMEGHEKLKVGGIGVLNCYYAHREENKNFQRRSYW
LLQGEPCHVVLVHYREVKGTRKNFNRSKETEEAVPYSQETEPNSEMDSSVPSCFLLNNYQ
VTSQSTDTTGLNSAQALEHVNTESAGNHQASSGFHPFFKLQQPTLEKFNAGLTDPSFPGP
ISDDYQGNFPIILGVDFASLTSADTNVVLPEKENLILGDLVISNFGETWEFGNHPQIQKE
CQTSEGTSRFSEQVVNLDEQLNFLGPCLPQTDEQEIHPMQNNLQVQLSDADHGSLLEETL
KKLDSFNRWMSKELGDVNEAHTQSSSEVYWDTVESENRADESNISPHVHLDNYTLGPSLS
QDQLFSIIDFSPNWASEGSKVKASVGKWYLDQNVHAESVYGVNSRFNEQDGNWVKLLNSR
EPFLPKTDKQDNDPMRSNLQVQLSDADHGYYLKSNPEINMALEGKTNSSFTIKKTGLDGS
LMEENLKKLDSFNRWMSKELGDVNESHTQSSSEVYWDTVENENRADESNISPQVHLDNYT
LSPSLSQDQLFSIIDFSPNWAYEGSEVKVLITGRFLKSQQEIENCMWSCMFGEVEVPAEV
IADGVIRCHTPVHKAARVPFYVTCSNRVACSEVREFEYRVSLIEDMDIMDNSGNTNDDLL
MRFKIFLSLTSAGALSTDSVIGREKSQVSSKISSLLEGDNDEWDQMLKLASEKDFSPEKV
QDKLLEKLLKEKLHVWLLQKAAEDGKGPSVVDEDGQGVLHFAAALGYDWALEPTIIAGVS
VNFRDVNGWTALHWAAFCGRERTVVSLVSLGAAPGALTDPSPKFPSGRTAADLASAEGHK
GIAGYLAESHLSTHLSSLKLDTGEGDAAEISGANAVQKVSERSATPVSDGDLPYGLSLKD
SLAAVCNASQAFARIYQVFRVESFNKKQLKEYGDDTFGMSDEQALSLLALKTNKSGQHDL
PVHAAAIRIQNKFRSWKGRREFLIIRQRIVKIQAHVRGHQVRKNHKKFTWSVGIIGKIIL
RWRRKGCGLRGFKSEALTEGHRMQDKYSEDDYDFLKEGRKQTEQRLQKALARVKSMAQYP
DARDQYRRLLNVVTDIQGSKVVGDGVPRSSEETADYNDEMIDFDAFLEDDTYMSSA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagggcaggcactctggtcttggtaaccaactaataaatgctaaccaaatagtc
acagaagcacaaaaacgatggctacatacagctgaaatttgtggaattcttcacaattat
aagaactttcctcttgctgcaaaacctgcaaatatgcctccaagtggatcattttttctt
tttaaccggaaggagctgagatgcttcagaaaagatggctataactggacgaagaagaaa
cgggatggaaagactgtgatggaaggtcatgagaagctcaaggtgggaggcattggggtg
ttgaactgctactatgcccatcgtgaagaaaataaaaattttcaaagacgcagttattgg
ttgctccaaggggagccctgtcacgtggttcttgtccactatcgggaagtaaagggcact
aggaaaaattttaaccgcagtaaagaaactgaagaagctgttccctattcccaagaaact
gaacccaattctgagatggatagctctgtgccctcttgttttcttctgaataattaccaa
gtaacttcacaaagtacagatacaacaggcctcaacagtgctcaggcattagaacatgtg
aatactgaatcagctggtaatcaccaagcaagttctggattccatcctttcttcaaattg
caacagcccacgttggaaaagtttaatgctggactcactgatccttcttttcctggacca
atttcagatgattatcaaggaaacttcccaatcattttgggggtggattttgcttcactt
acttcagcagataccaatgtagtccttcctgaaaaagaaaacttgatactgggggacctt
gtcattagcaactttggtgagacatgggagtttgggaatcaccctcaaatccaaaaagag
tgtcagacttctgaaggcacttctaggttttctgaacaagttgttaatttggatgaacaa
ctcaattttttggggccttgccttccacagactgatgagcaagaaattcatcctatgcaa
aataaccttcaagtacagctttcagatgcagatcatggctctctattggaagaaactctg
aagaagcttgacagtttcaaccgatggatgagcaaggaacttggagatgtaaatgaagca
catacgcagtccagttctgaggtctattgggatactgttgaaagtgaaaatagggctgat
gagtccaatatttctcctcacgtgcacttggataactatactctcggtccctctctatcc
caggaccagcttttcagcattattgatttctcaccaaattgggcatccgagggctcaaaa
gttaaggcttctgtaggcaaatggtacttggatcagaatgtgcatgcagaatcagtgtat
ggtgtcaattcaaggtttaatgaacaagatggtaattgggtcaaactactcaattctcgg
gagcctttccttccgaagactgataagcaagataatgatcctatgcgaagtaaccttcaa
gtacagctttcagatgcagatcatggatattatctgaaatcaaatcccgagattaatatg
gccctagagggaaaaaccaactcctctttcactataaagaaaactgggttagatggctct
ctaatggaagaaaatctgaagaagcttgacagtttcaaccgatggatgagcaaggaactt
ggagatgtaaatgagtcacatacgcagtccagttctgaggtctattgggatactgttgaa
aatgaaaatagggctgatgagtccaatatttctcctcaagtgcacttggataactatact
ctcagtccctctctatcccaggaccagcttttcagtattattgatttctcaccgaattgg
gcatacgagggctcagaagttaaggtcctgattactggaaggttcttgaagagtcaacaa
gaaatagaaaattgcatgtggtcctgtatgtttggggaagtggaagttccagctgaggtt
atagcggacggtgttatacgatgtcatactccagtacataaggctgcaagggttcctttt
tatgtgacatgttccaatagggtagcgtgtagtgaagtgcgagaatttgagtaccgagtc
agccttattgaagatatggatattatggataatagtggcaacacaaatgacgatcttctt
atgcgatttaaaatttttttgtctctgacctctgccggcgctctgtctactgattctgtc
attggaagggagaaatcccaagtaagcagtaaaatcagttcattgctagaaggggacaat
gatgaatgggatcaaatgttaaagcttgcttctgagaaggatttctctcctgaaaaagta
caggacaagcttcttgaaaagctactgaaagagaagttgcatgtatggctcctgcagaaa
gcagcagaagatggaaaaggcccttctgttgtagatgaggatggccaaggtgtactgcat
tttgcagctgctcttggctatgattgggccctagaaccaacaattattgcaggtgttagt
gtcaatttccgtgatgtgaatggatggactgcacttcattgggcggcgttttgtggcaga
gagcggacggttgtttcccttgtctctcttggtgcggctcctggtgcattaactgatcca
agtcccaaatttccttcaggcagaacagctgctgacctagcttctgctgaaggacacaaa
ggaattgctggttatcttgcagaatctcatctgagtacccacctttcatctcttaagttg
gacactggggaaggcgatgctgcagagatttctggggctaatgcagtacaaaaagtttca
gaacgaagtgcaactccagtcagtgatggggatttaccatatggattatcattgaaggat
tcactagctgctgtctgtaatgctagccaagcttttgctcgtatttatcaagttttcagg
gtggagtcctttaataaaaagcagttaaaggagtatggtgatgatacatttggaatgtca
gatgaacaagctctttcacttcttgctcttaagacaaacaaatcaggacaacatgatctg
cctgtgcatgctgctgcaatacggatccaaaataagttccgcagctggaagggtagaaga
gaatttttgataatcaggcagcgaattgttaaaattcaggcccatgtaagaggccaccag
gtcaggaagaaccataaaaagtttacctggtcggtaggaattatagggaagattattttg
cgttggagacgaaaagggtgtggtttgcgtggatttaaatctgaagcacttaccgagggc
cacagaatgcaagataaatattcagaggatgactatgatttcctgaaagaaggtagaaag
caaactgagcagaggctgcaaaaagcgcttgctagggtgaagtccatggctcagtatcca
gatgcaagagatcaatatcgtaggctgctgaacgttgtgactgatattcagggatccaag
gttgttggtgatggagttccacgcagttcagaagaaacggctgattataatgatgaaatg
attgattttgatgcattcttggaggatgacacttacatgtcttcagcctga
DBGET
integrated database retrieval system
