KEGG   Castanea sativa (European chestnut): 142624735
Entry
142624735         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142624735
  KO
K14791  periodic tryptophan protein 1
Organism
csaa  Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csaa03009]
    142624735
Ribosome biogenesis [BR:csaa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    142624735
  Pre-60S particles
   Other pre-60S particles
    142624735
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_EIPR1 WD40_Gbeta WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_HPS5 WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WDR54 Beta-prop_IFT122_1st Beta-prop_SPT8 MIOS_WD40
Other DBs
NCBI-GeneID: 142624735
NCBI-ProteinID: XP_075654585
LinkDB
Position
2:36522460..36529476
AA seq 495 aa
MISSISWLPKGAANPVPAVADPPSKEEIDEIVKSTAFDKSGQSDNEDGDEDMDGDDASNE
AGEVAQALEVADALGRPSNTAKSGTSFDSITDGLRELDMENYDEEDDGIELFSTGLGDLY
YPSNDMDPYLKDKGDDDSEEVEDMTINPTDAVLVCAHSGDEVSQLEVWIYEESDDGDSNM
YVHHDIIISANPLCTAWLDCPLKGGEKGNFIAVGSMEPSIEIWDLDIIDEVQPCVVLGGI
AERKEKKNKISVKYKKDSHKGPVLGLAWNKEYRNILASASADKRVKIWDVATGKCDITME
HHTDKVQAVAWNHHAPRVILSGSFDRSVVMKDGRMPEHSGYKWSVTADVESLAWDPHNQN
LFVVSLEDGTVQGFDVRAAKSDATSQLKPSFTLHAHDKAVCTVSYNPSAPNLLATGSEDK
MVKLWDLSNNQPSCVASTNPKVGAVFSMSFSEDSPFLLAMGGSKGKLKVWDVLSDDRVHQ
RFGNYIKRKIPQSGS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgatatcatcaatttcttggttacccaaaggagccgccaaccctgtacccgccgtagca
gaccctccttccaaagaagaaatcgacgagatcgtcaagtccaccgctttcgacaaaagt
ggacaaagtgacaatgaggacggtgatgaagatatggatggtgatgatgcgtccaatgag
gctggtgaagttgcccaggcattagaggtagcagatgcacttggcagaccttccaatact
gcaaagtcagggactagttttgacagcataactgatggtttgagggaacttgacatggaa
aattatgatgaagaagatgatggcattgagttatttagcacggggcttggagacctttac
tacccaagtaatgacatggatccatatctaaaagataagggtgacgatgactctgaagag
gttgaggacatgactattaatccaactgatgctgtcctagtttgtgcacatagtggggat
gaagtcagtcagcttgaggtttggatatatgaggaatctgatgatggtgattcaaacatg
tatgttcaccatgatatcatcatttcagcaaatcctctttgtactgcatggctagattgt
ccacttaaaggtggagaaaaagggaattttatagctgttggctcaatggaaccttctatc
gaaatatgggatcttgacattattgatgaagtacaaccatgtgtggtgctgggtggcatt
gctgagaggaaggagaaaaaaaataagatatcagtcaagtacaaaaaagacagtcacaaa
ggtccagtgcttggtcttgcttggaacaaggagtacaggaatatacttgctagtgcaagt
gctgacaaacgagttaaaatttgggatgtggctactggaaaatgtgatattaccatggag
catcatacggacaaggttcaagcagttgcatggaatcatcatgcaccacgagttattctt
agtggatctttcgatcgttcagtagtcatgaaggatggtagaatgccagagcattctggt
tataaatggtcagtcacagctgatgtagaaagcttggcatgggatccacacaaccaaaac
ttatttgtggtgagtcttgaagatggtactgtccagggtttcgatgtccgggcagccaag
tctgatgcaacttctcagttaaaacctagttttactctccatgcacatgacaaagccgtt
tgcacagtctcctataatccttcagcacctaatcttcttgcaactggatccgaggataaa
atggtaaagctttgggatctatcaaacaatcaaccttcatgtgttgcatccacaaatcct
aaagtaggagctgtcttttccatgtccttctcagaggacagcccatttttgctggctatg
ggaggctctaaggggaaattgaaagtatgggacgtattatctgatgatagggtccatcaa
agatttgggaactatatcaagcggaagatacctcaatctggctcttga

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