Castanea sativa (European chestnut): 142625706
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Entry
142625706 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142625706
KO
K03124
transcription initiation factor TFIIB
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142625706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142625706
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
142625706
Prokaryotic type
Archaeal type
TFB
142625706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
142625706
NCBI-ProteinID:
XP_075655515
LinkDB
All DBs
Position
2:47644961..47650138
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AA seq
878 aa
AA seq
DB search
MKCPYCPSAQGRCATTSSGRSITECASCGHVIEERQSQPHHLFHLRSQDNPLCLVTSDLP
SHLENDENDPFEPTGFITAFSTWSIEPSPLFLRSSLSFSGHLAELERTLESSSSSSSSST
VVVDNLRAYMQIIDVASILGLEYEISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIR
EAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKS
AQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK
VYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSAPKGDLVEGNSSFEREKLQEIK
VNKPDEVPDMGHQARVKEEAESRVNSQGPSNPVLNKPPAFWQAQATIGASGPRGDNNQNI
TQGTDINELHSNSQELEQKVDKDANGATNSLKPNQLSSPPTSSGGSVMHVWSPYMSQPPN
IPVVKPPNVERDSNQNITRGTDINRLHSNHQELEHRVDKDASGTDSLKPNQLSSPPTSSA
SSVTQVWSSYMSLPLNIPVVKPPNVEGDNNQNITRGTDINRLHSNRQELEHRVDKGANGA
TNSLKPIQLSSPPTSSASSVMQAWSSYMSEPLNIPPNVVRDNHQGTDINRLHSNHQVLEH
KVVKGANGASNSRKPNQLSSSPTLNVSSIRHQYWSPYMPKPQSIPCQNITGGTDINELHS
IHQELGHNVVDEDANGATNSLKPNQLSSSAISSENSVMQVWSSYMSQPLNIPVVNVVRDN
NQNITRGTNINQMHSNRQELEHKVDKGGNGATNSLKPNQLSSPPTSSSSSVGQYWSPYMS
RPLNVPVVQTPNVGSGYAEPKRSGSLNGSRSANQCGDK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccatactgtccgtcggcgcaggggcggtgcgccaccacgagctcaggccgg
tcgataacggagtgcgcctcgtgcggccacgtcatcgaggagcgtcaatcccagcctcac
cacctctttcacctccgctcccaagacaaccctctctgcctcgtcacctccgacctccct
tcccatctcgagaacgacgagaacgacccgttcgagcccaccgggttcatcaccgccttc
tcaacctggtccatcgagcccagccctctcttcctccgctcctctctctccttctccggc
cacctcgccgagctcgagcgaactctcgaatcttcttcttcgtcctcttcgtcgtcgacc
gtcgtggtcgataatctcagggcgtacatgcagattatcgacgtggcgtcgattctgggg
ttggagtacgagatatcggaccacgcgtttcagctatttagggattgttgctccgctact
tgtttgaggaatcggagcgtggaggcactcgccactgctgcgcttgtccaagccattagg
gaggcccaagagccaagaactctccaggaaatttcaattgcagccaatgtacctcagaag
gagattgggaagtacatcaagatacttggtgaagcgctacaactaagtcagcccattaac
agcaattccatatcagtccatatgccacggttttgcacacttctccaactcaacaaatct
gctcaggagcttgcaactcacattggagaagttgttattaataagtgcttctgcactcgg
aggaaccccataagcatatctgctgccgctatttatttggcctgccaactagaagacaaa
cgcaaaacccaggcagagatttgtaaggtgacaggcctcactgaggtcaccctccgtaag
gtctacaaggagttgttagagaattgggatgacttactcccatctaattatactccagct
gttcctccagagagagcatttcccacaactgtgattgcttcgggccgttcttcagcacct
aaaggtgatttagttgaagggaattcttcattcgagagagaaaagctgcaggaaattaaa
gttaataaaccagacgaggttccagacatgggtcatcaggccagagtaaaagaggaagct
gaaagtagagttaactctcaagggccctctaatccagtgttgaacaaaccacctgcattt
tggcaagctcaggctacaattggagcttctggtcctaggggagacaacaatcagaatatc
actcaaggaacagacatcaatgaactgcactctaacagtcaagagttagagcaaaaagta
gataaggatgcaaatggtgctactaattccctaaagcctaaccagctttcaagtccccca
acttcaagtgggggttcagtcatgcatgtttggtctccttatatgtctcagcctcccaat
attccagttgttaagccaccaaatgtagagcgagactccaatcagaatatcactcgagga
acagacatcaatcgactgcactctaaccatcaagagttagagcacagggtagataaggat
gcaagtggtactgattccctaaagccaaaccagctttcaagtcccccaacttcaagtgca
agttctgtcacgcaggtttggtcttcatatatgtctctgcctctaaatattccagttgtt
aagccaccaaatgtagagggagacaacaatcagaatatcactcgaggaacagacatcaat
cgactgcactctaaccgtcaagagttagagcacagggtggataagggcgcaaatggtgct
actaattccctgaagccaatccagctttcaagtcccccaacttcaagtgcgagttcagtc
atgcaggcttggtcctcatatatgtctgagcccctaaatattccaccaaatgtagtgcga
gacaaccatcaaggaacagacatcaatcgactgcactctaaccatcaagtgctagagcac
aaggttgttaagggtgcaaatggtgctagtaattcccgaaagccaaaccagctttcaagt
tccccaacattaaatgtgagttcaatccgtcatcagtattggtccccgtatatgcctaag
cctcaaagcattccttgtcagaatatcaccggaggaacagacatcaatgaactgcactct
attcatcaagagttagggcacaatgtagtagatgaggatgcaaatggtgctactaattcc
ttaaagccaaaccagctttcaagttccgcaatttcaagtgagaattcggtcatgcaggtt
tggtcctcatatatgtctcagcctctaaatattccagttgttaatgtagtgcgagacaac
aatcagaacatcactcgaggaacaaacatcaatcaaatgcactctaaccgtcaagagtta
gagcacaaggtagataagggaggaaatggtgctactaattccctaaagccaaaccagctt
tcaagtcccccaacttcaagttcgagttcggtcgggcagtattggtccccgtatatgtct
aggcccctaaatgttccagttgttcagacaccaaatgtagggtcaggttatgctgaacct
aaaagatcagggagtctaaatggaagcagaagtgccaatcagtgtggggataaatag
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