Castanea sativa (European chestnut): 142625721 Help Entry 142625721         CDS       T11266                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism csaa  Castanea sativa (European chestnut) Pathway csaa03440   Homologous recombination csaa03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:csaa00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     142625721    03450 Non-homologous end-joining     142625721  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csaa03032]     142625721    03400 DNA repair and recombination proteins [BR:csaa03400]     142625721 DNA replication proteins [BR:csaa03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     142625721 DNA repair and recombination proteins [BR:csaa03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      142625721     BRCA1-C complex      142625721    NHEJ (non-homologous end-joining)     MRX complex      142625721 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 AAA_21 AAA_15 Rad50_zn_hook SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  142625721 NCBI-ProteinID:  XP_075655534 LinkDB All DBs Position 2:complement(26174305..26218994) Genome browser AA seq 1315 aa AA seqDB search MSTVDKMLIKGIRSFDPENKLVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHSGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQEKAESLKI QMQELEGSIQNVDAKVHHTEITLKDLRKLQEQIAIKTVERSTLFKEQQKQYAALAEENED TDEELNEWKTKFEERIALLESKISKLEREMNDTETKSSFLKQTINEYIWEISKLQTEAEA HMSLKTERDTTIQKLFARHNLGSLLDIPFSNEVSLSLINRIKSRLMDLEKDMEDKKISNE NELKTAWDCYMDANDRWKNAEAQKQAKLEIKSGILKRIEEKDNERDSFELQNSHVNLSHI DEREKNMRIEVERKTNQLAEREFESNIRQKQSDLYSIEQKIKAVNREKDIMAADSEDRVK LSLKKAELENHKRKHKKIVDEYKDRIRGVLKGRLPPDKDLKKEITQVLRSIGMEFDDLNT KSREAEKEVNMLQNKIEEVNNNLSKYRKDMESRKRFIESKLQSLDQQSLIDSYLKVLESA KEKSHVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASS AEHMKVLAVDSSSADSHFQQLDKLRMVYEEYVKIGKETIPNAEKDLHELTQELGQKSQAL DDVIGILAQVKADKDSIEALVQPVETADRLFLEIQTWQKQVDDLEYKLDFRGQGVRTMEE IQLELNTLQSTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVRKA EEELERLTEEKSQVDLDEKHLTEALGPLSKEKDKFLSDYNELKAKLNREYEEQSEQKRNY QQEVSSLLKINSKIKEYHDLKKGDRLKELQEKKSLSESQLQSCDIRKQEILAELNKSKDL MRNQDQLRRNIEDNLNYRKTKAEVDELTRDIESLEERILKIGGVSTFEAELGKLAHERER LLSELNRCHGTTSVYQSNISKNKIDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYN ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTG DAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLR IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD NT seq 3948 nt NT seq  +upstreamnt  +downstreamnt atgagcactgtggataagatgctaatcaaaggcatccggagcttcgacccggagaacaag ctcgttatcaccttcttcaaacccttaaccctaatcgtcggccccaacggagctggcaaa accactattatagagtgcttaaagctttcgtgcacaggagaattgcctcccaatgcgcgt tcaggccacagtttcattcatgaccccaaggttgcaggggaaacagagacaaaaggacag attaagctccgattcaagactgcagctggcaaggatgtggtgtgcataaggtcgtttcag ctgacgcagaaggcctccaagatggagtataaggccatcgagagtgttcttcaaacaatt aatcctcattctggtgaaaaagtttgccttagctatcgatgtgctgacatggaccgagag atccctgctttaatgggcgtctctaaggctgttctcgaaaatgtcatttttgttcaccaa gatgaagctaattggcctttgcaagacccttccacccttaaaaagaagttcgacgatatc ttctccgccacccgatatacaaaggcattggaggtcataaaaaaacttcataaggatcag gctcaagaaataaagacctacaaactcaaattggagaatcttcaaactttgaaagatgct gcatataagcttcgggaaagcattgctcaagatcaagagaaagcagaatctctgaaaatt caaatgcaggaattggagggaagcatccaaaatgtggatgctaaagttcaccacactgaa ataaccctgaaagatttgcggaaactacaggaacagatagcaatcaagactgttgaaaga agcactttgtttaaggagcagcagaaacagtatgctgctcttgctgaggagaatgaagac actgatgaagagttgaatgaatggaaaaccaagtttgaagaaaggattgcacttttggaa tctaaaataagcaagttggagagggaaatgaacgacacagagactaaaagttcttttctt aagcagacaattaatgaatatatctgggagattagcaagcttcaaactgaagctgaagct catatgtccttgaagactgaacgagataccaccatccaaaaactttttgcaaggcataat ctagggtctcttctagatatccccttcagcaatgaagtttctttgagcctcataaatcga ataaaatcaaggttgatggatcttgagaaggatatggaggataaaaagatatcaaatgaa aatgaacttaagacagcatgggactgttatatggatgcaaatgaccgttggaaaaatgct gaggcccagaagcaggctaaattagagatcaagagtggcatcttgaaacgcatagaagag aaggataatgagcgtgattcgttcgaacttcaaaactctcacgttaatctttctcacatt gatgaaagagaaaagaacatgcgtattgaggttgagagaaaaacaaaccagcttgctgaa agagaatttgaatcaaacatacgtcaaaagcaaagtgatctgtatagcatagagcaaaaa ataaaggctgttaatcgagagaaagacattatggctgctgattctgaggacagagtgaaa ctgtctctaaagaaggcagagttggagaatcacaagaggaaacacaaaaaaatagttgat gagtacaaggacagaattagaggagtactgaaagggaggcttccacctgacaaggatttg aaaaaagaaatcactcaagtcctaaggtctattggaatggagtttgatgacttgaataca aaatcccgtgaagctgagaaggaggtgaatatgctgcaaaataaaatagaagaagttaat aataatttgtccaaatatcgcaaggatatggaatcaaggaagagatttattgaatccaaa cttcagtccttggatcaacaatctctaattgattcttatctcaaagtcttggagtcagct aaagagaaaagtcatgtccagaaaagcaaatacaacattgcagatggtatgcggcaaatg tttgatccctttgaaagggttgcccgtgctcatcatgtttgcccttgctgcgagcgccct ttctctgcagaagaggaagatgagtttgttaaaaagcaacgagtgaaggcagcaagttct gctgagcatatgaaagtgctggctgtggattcctcaagtgctgactctcattttcagcag ttggacaagctccgtatggtttatgaagaatatgttaaaattggaaaggaaacaattcct aatgctgagaaagatttgcatgagctgactcaagagctgggtcaaaagtctcaggccctt gatgatgtcataggtattttagctcaagtaaaggctgataaggactcaattgaggccttg gtgcaacctgttgaaaccgctgacaggcttttcctagaaattcaaacttggcaaaagcaa gttgatgatttggagtataagcttgattttcgaggccaaggtgtgagaaccatggaagaa atacagttggagctgaatacattgcaaagcacaaaggatggtttgcataatgaactggag aagttaagggatgagcagaggtacatggaaaatgatttatccaacattcagatacggtgg catactctaagggaggagaaagtcaaagcagccaatacattgcgtgatgttagaaaggca gaagaagagttagagcgtttgacagaggaaaaaagtcaagttgatcttgatgagaagcat ttgacggaggctcttggccctttatccaaggagaaagataaatttctgagtgactacaat gaattgaaagctaagcttaatcgcgaatatgaggagcagtctgagcaaaaaagaaattac cagcaggaagtctcaagtcttctcaaaattaattctaaaattaaagagtatcatgattta aagaaaggagataggctgaaagaactgcaagaaaagaaatctctatcagaatctcagctc caaagttgtgatattaggaagcaggaaattttagctgaactaaacaaaagtaaagacttg atgaggaatcaagatcaattaagacgaaacattgaggacaacttgaattacaggaaaacg aaggctgaagtagatgagcttacccgtgacattgaatcactggaagaaagaatattgaag attggtggggtttcaacatttgaagctgaacttggaaagctcgcccatgaaagagagaga cttctttcagagttaaacaggtgtcatggaacgacgtctgtttaccaaagtaatatttca aaaaacaaaattgatctaaaacaggcacaatacaaggacattgacaagcggtactttgat cagctaatccagcttaagacaacagagatggcaaacaaggacctggacagatactacaat gcgcttgacaaagcacttatgcgcttccacacaatgaaaatggaggaaataaataaaatt ataagagaattgtggcagcaaacttacagaggacaagatatagattacataagtatccat tcggattctgaaggtgctgggactcgttcttacagctacaaggttctcatgcagactggt gatgcagagttagaaatgaggggaaggtgtagtgctgggcagaaggtccttgcttccctg atcatacggttggcattagctgaaactttctgcctcaactgtggtatactagcactagat gaaccgaccacaaatttagatggcccaaatgctgagagtctagctgcagctcttctgaga attatggaggacagaaagggccaggaaaattttcagctgatagtgattactcatgatgag cgttttgctcaactaatcggtcaacgacagcatgccgaaaaatattatcgggtcgcaaag gatgaccatcagcacagtataattgaagcccaggagatatttgattga

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