Castanea sativa (European chestnut): 142625838 Help Entry 142625838         CDS       T11266                                  Name (RefSeq) putative RNA helicase SDE3   KO K18422   helicase MOV-10 [EC:5.6.2.5] Organism csaa  Castanea sativa (European chestnut) Brite KEGG Orthology (KO) [BR:csaa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csaa03019]     142625838    03036 Chromosome and associated proteins [BR:csaa03036]     142625838 Enzymes [BR:csaa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.5  RNA 5'-3' helicase      142625838 Messenger RNA biogenesis [BR:csaa03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      142625838 Chromosome and associated proteins [BR:csaa03036]  Eukaryotic type   Gene silencing    microRNA pathway     Other miRNA pathway proteins      142625838 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 MOV-10_beta-barrel AAA_30 ResIII AAA_19 UvrD-helicase AAA_22 DEAD Mov-10_helical Helicase_RecD PhoH AAA_16 SLFN-g3_helicase Cep192_D4 AAA ATPase_2 LTD nSTAND3 SNF2-rel_dom NPHP3_N Motif Other DBs NCBI-GeneID:  142625838 NCBI-ProteinID:  XP_075655684 LinkDB All DBs Position 2:1658428..1665354 Genome browser AA seq 879 aa AA seqDB search MGDFGGKWDEEFSTVGDKGEIGFLDFGDDQSVCSYNPDQEGSVVISVPFPMSGGNPQSIV VRETAAESITIKNTTSEPVTLWSVSIFASTPENSFKLSLMKPPSGNETSRGYVDFFTLED RMIQPRETLTVWISCKPKAIGLHTSVMYFDVESTRIERVVFLMCDDNISQSLASRRPYSR DRRKKQFGTDGTFVMGVRPPKKTDKVFKNRLPRYDIPREVRELLEKKQIPNAVEEGLSIK NYTDFFKNLVFMEEIQLEEDMRGHDMECVTMRKRGAHFLSLEVPGLAERRPSLVRGDDIF ARLASEDENETTSYQGFIHRVEADEVYLKFAQDFHSWHRDGNLYNIRFKYNRVNMRRLYQ AIEAAAKLEIEFLLPSEAPNMRLIETTPLVPISCHLNPEQMHAVEMILGCKGAPPYVIHG PPGTGKTMTIVEAILQLYRTRKNARILVCAPSNSAADHILEKLLSEKAVKVQDNEIFRLN APTRNYEDITPNIIRFCFFDEHIFKCPPPSALMRYRIVISTYMSASLLYAEDVRRGHFSH IFLDEAGQASEPETMIPIANLCLRKTVVVLAGDPMQLGPVIYSKEAETYGLGKSYLERLS ESDIYYNGEENYVTKLVRNYRCHPEILYLPSMLFYDSELIACKDDNSAFLDGVNLLPNRD FPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEVISRLTDTGNLSEEDIGVITPYRQQVLK LKNTLESLEMTDIKVGSVEQFQGQEKKVIIISTVRSTIKHNEFDRTYCLGFLSNPRRFNV AITRAISLLVIIGNPHIINRDPHWNMLLWHCADNNSYQGCALPEKEEFVDEDPTQENYLN NDEENPLPSEEVECGQESWQEDYPKPNKDEDEWSDGWKD NT seq 2640 nt NT seq  +upstreamnt  +downstreamnt atgggtgactttggtggtaagtgggatgaggaattctctactgttggagacaaaggagaa attgggtttcttgattttggggacgatcaatctgtgtgtagttacaacccagatcaagag ggttctgttgttatttctgtcccatttcctatgtcagggggaaacccgcaatcaatagta gtaagagaaaccgctgcagagtcgattaccatcaagaatactactagtgaaccagtgact ctctggtctgtttcaatttttgcctcaactcctgagaattcattcaaactttctctgatg aagcctccatctggaaatgaaactagcagaggctatgtagactttttcaccttggaggac aggatgattcagccaagagagaccttgactgtatggatctcttgcaaaccaaaggcaatc ggtttgcacacttcagttatgtattttgatgttgagagtacgaggatagaacgagtggtg ttccttatgtgtgatgataacatatcacagtctttggcttctagaaggccttattcaagg gacagaagaaagaagcaatttgggaccgatggtacatttgttatgggtgtacgtcctcca aagaaaacagacaaagttttcaagaacagacttcctcgatatgacattccaagggaagtc agggaattgcttgagaaaaagcagatccctaatgctgttgaagaaggcctttcaattaaa aattatactgacttcttcaagaatttagtattcatggaagaaatacaattggaggaagac atgaggggtcatgacatggaatgtgtaactatgaggaagaggggagctcattttttgtcc cttgaggttccaggtcttgctgagagaaggccttcacttgtccgaggagatgatattttt gccaggcttgcctctgaagatgaaaatgagactacttcatatcagggttttatccaccgt gttgaggctgatgaagtttacctgaagtttgctcaagactttcactcgtggcatagagat gggaatctctataatatacggttcaaatataatcgagtcaacatgagaaggttatatcaa gccattgaagccgcagcaaagttagagatagagttcctacttccatctgaggcccctaac atgaggctgattgaaaccactccactggtgcctatatcatgtcatcttaatcctgagcag atgcacgcagttgagatgatccttggctgcaaaggagcaccaccttatgtgattcatggg cctccgggtacaggtaagaccatgactatagtggaagcaatcctccagctctacagaact cgaaagaatgctaggattcttgtgtgtgccccttcaaatagtgcagcagaccacattcta gagaagctcctcagtgaaaaggctgttaaggttcaggataatgaaatattcaggctcaat gcacctacccgtaactatgaggatataacacctaatattatccgcttttgcttctttgat gagcatatcttcaagtgtcctccaccaagtgccctcatgcgatataggatcgtcatatcg acttatatgagtgcctctcttctttatgcagaagatgtcaggcgaggccacttctctcat attttcttggatgaggctggccaagcttcagagccagaaaccatgattcctatagccaat ctctgtctaagaaagacagttgttgttcttgctggagatcccatgcagttaggtccagta atatactctaaagaggcagaaacttatggattggggaaatcgtacttggaaagattgtct gaatctgacatttactataatggggaggaaaattatgttacaaaattggtgcggaactac agatgtcacccagaaattctttatcttccttcaatgctgttctatgatagcgaattaatt gcatgtaaagatgacaacagtgccttcttggatggggtgaatctccttcctaacagggat tttcctgttcttttctttggtatccaaggttgtgatgagagggaaggaaataatccatcg tggtttaaccgaatcgaggtaagcaaggtagtagaggtcatcagccgactgactgatact ggaaatctgagtgaggaagatattggcgtgataacaccttatcggcagcaagtgctaaaa ctaaagaacacccttgaaagtttggagatgacagatatcaaggttggaagtgttgaacaa tttcaaggtcaagagaagaaagtaattattatatctactgtccgctcaacaatcaaacac aatgaatttgaccgaacgtattgtttgggatttttgagcaatccaagaaggtttaatgtg gctataacccgtgccatatctttgttggtcataatcggtaatccacacatcatcaacagg gacccccactggaacatgcttttatggcattgtgcagacaacaactcatatcagggttgt gctctccccgaaaaggaggagtttgttgatgaggatcccacacaggaaaattacttgaac aatgatgaagaaaatcctctaccatctgaagaagttgaatgcggtcaagagtcttggcaa gaagattatcctaaacctaataaggatgaagatgaatggtctgatggctggaaggattaa

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