Castanea sativa (European chestnut): 142625944
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Entry
142625944 CDS
T11266
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
142625944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142625944
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
142625944
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2043
UVSSA_N
VHS
HSBP1
Motif
Other DBs
NCBI-GeneID:
142625944
NCBI-ProteinID:
XP_075655819
LinkDB
All DBs
Position
2:51641908..51647406
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AA seq
653 aa
AA seq
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MIMEEGRERDGGKVVSLIEKATNSTAAEVDPRLLKAIKSIVRYSDIELRLAANTLLDLMK
RNHSQVRYLTLLIIDQLFMRSKLFRSILVDNLDQLLSLSVGFRRTLPLPAPPAIASILCS
KAIEFLEKWNFSFGIHYRQLRLGFDYLKNTLKLQFPNLQANAARIQQERAERERRSSEIL
LKKFEMFKDNFSSIKEEIMSTIDEIGECLDIVRTNEEFMPLPPTDDEYFEEFRSSELLQI
RLNTLKEGEKVHENTDNKVVFDALRELYKLLETKHFVSVQEWISVLLRVEVADNRFRDSA
LKELIDIQNRLKSVKKKCEESGCALPTTADRDEEEDDFWEEGKIGPLENERSTVPNNHDE
YFSMKITSNKSKNKTTESSKKDCNDNEILCPEGGETNLDPLRSKLLAEAPVMKWGSFLDN
WGSHRKVLANQRGLELESHWGRVDYDAVIPAEKMPELNVHATLYEEQQTDIQPCRAPLSK
GGLCQRRDLRVCPFHGPIIPRDDEGKPLNQNSLKEEISLDLGINSIEQLAKQAVKNVRER
DKEVANKREIDKKSLKRAKLAKVREHNETVLRDAALTSTSRSASIGEDMGVTDGEKLSAR
NKKETLSSMLHKKVTPKDRIAQRLLNTRAKDSTTRQLTLGEDANYREAFPNQW
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgataatggaagaggggagagagagagacggagggaaggtggtgagtctgatagagaag
gcgaccaactccacagctgctgaggtggacccacgtctccttaaggctatcaaatccatt
gtccgctattcggatatagagctccgactcgccgccaatacccttttggatctcatgaag
cgcaaccactctcaggtaaggtacctgacactcctgataattgaccaattgttcatgcgc
tcgaagcttttcagaagcatccttgttgacaacttggatcagttgctgagtttgagtgtt
gggttcagaagaactctgcctctcccggctcctcctgctattgcttctattttgtgctct
aaggcaatcgaattcttggagaagtggaacttttcctttgggattcattacaggcagctc
agattagggtttgattaccttaaaaacacccttaagttgcagtttcctaatctacaggcc
aatgcagctcggattcagcaggagagagcagaacgtgaaaggcggtcaagtgagattttg
ctaaagaaatttgaaatgttcaaggacaatttctcatctattaaggaagagatcatgtct
accattgatgagattggggaatgcttagacatagtccgtacaaatgaggaatttatgcct
ctgcctcctacagatgatgaatattttgaagagtttcgttcttctgaactactgcaaatc
cgtctcaatactttaaaagaaggggaaaaggttcacgagaacactgacaataaagtggtt
tttgatgcattaagggagctgtacaagcttctagagacaaagcattttgtttcagttcaa
gaatggatttctgttcttctaagggttgaagtagcagacaacaggttcagagattccgct
ttaaaggagttaattgatatacaaaatcgtctcaaatcagtgaagaagaagtgtgaagaa
tcaggttgtgcccttccaactactgcagatcgcgatgaagaagaagatgatttctgggag
gagggtaagattggaccacttgagaatgagagatctactgttcccaataatcacgatgaa
tatttttccatgaaaataacttctaataagtcaaaaaataaaactactgaaagcagtaaa
aaagattgtaatgacaatgagattctctgtcctgaaggtggtgaaaccaatttggaccct
ttaagaagtaagcttctggctgaagctcctgtgatgaagtggggctctttcttggataac
tggggttcacacaggaaggttttggctaaccagcggggattggagcttgaaagtcactgg
ggtagggtggactatgacgcggttattccagctgagaaaatgcctgaactgaatgtacat
gcaactctttatgaagagcagcaaactgacattcaaccctgcagggctcctttgagcaaa
gggggactttgtcagagaagagacctgagagtttgtccatttcatggacctatcatacct
cgagatgatgaaggaaagccactcaatcaaaactctttaaaagaagagatatctcttgat
ttggggatcaattccattgagcagttagcaaaacaagctgtgaagaatgttcgtgagaga
gataaagaagtagcaaataagagagaaattgataaaaagtcactgaagcgtgcaaagctt
gcgaaagttcgggagcacaatgaaacagttctaagggatgctgccttgacatcaacttca
agatctgcatctattggagaagatatgggggtgactgatggtgagaaactgtcagccaga
aacaagaaggaaacactctcatccatgctgcacaagaaagtgacaccgaaagataggata
gctcagaggcttttgaatacacgggcaaaggattcaactacaagacaactcacattgggt
gaagatgcaaattaccgagaagccttcccaaatcaatggtaa
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