KEGG   Castanea sativa (European chestnut): 142626057
Entry
142626057         CDS       T11266                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa04144  Endocytosis
csaa04145  Phagosome
csaa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142626057
   04145 Phagosome
    142626057
   04148 Efferocytosis
    142626057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csaa04131]
    142626057
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142626057
   04031 GTP-binding proteins [BR:csaa04031]
    142626057
Membrane trafficking [BR:csaa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    142626057
Exosome [BR:csaa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142626057
  Exosomal proteins of other body fluids (saliva and urine)
   142626057
  Exosomal proteins of colorectal cancer cells
   142626057
  Exosomal proteins of bladder cancer cells
   142626057
GTP-binding proteins [BR:csaa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    142626057
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 ATP_bind_1 nSTAND3 AAA_16 RsgA_GTPase AAA Septin AAA_7 cobW AAA_22 AAA_24 PduV-EutP nSTAND1 SRPRB IIGP RNA_helicase NACHT DAP3 NB-ARC AAA_5 NTPase_1
Other DBs
NCBI-GeneID: 142626057
NCBI-ProteinID: XP_075655943
LinkDB
Position
2:complement(32375780..32379279)
AA seq 209 aa
MDVSTKKRTLLKVIVLGDSGVGKTSLMNQYVYKKFNQHYKATIGADFVTKELQIDDKQVT
LQIWDTAGQERFQSLGAAFYRGAECCVIVFDVNAHKSFEAMNTWREEFLKQADPDTPDNF
PFILLGNKIDMDGGNSRVVTEKQAKEWCAFRGNIPYFETSAKEGYNVDEAFLCVAKTALA
NEQGCDLETYFQGISESLSGTEQKGFCAC
NT seq 630 nt   +upstreamnt  +downstreamnt
atggatgtgtctacaaaaaaaagaaccttgctaaaagttattgtccttggcgatagtggg
gtggggaagacatctttgatgaatcaatatgtttataagaagttcaatcaacactacaaa
gctacaattggtgctgactttgtcacaaaagaactacaaattgatgacaaacaggtcact
ttgcagatttgggacactgcaggacaggaaaggttccaaagtctaggggctgcattctac
agaggagcagaatgttgtgttattgtatttgatgtaaacgcccataagtcatttgaagca
atgaacacttggcgtgaagagtttctcaaacaggcagatccggatacacccgacaacttt
ccctttatattacttggaaataagattgacatggacggtggaaacagccgagtggttaca
gaaaagcaagctaaggaatggtgtgctttcagaggaaatataccttactttgagacctca
gcaaaagagggctacaatgtagatgaagcatttctgtgtgttgcaaaaactgcactggct
aatgaacaaggatgtgatctggaaacttacttccagggtatctcagaatctctatcaggc
actgaacagaagggattttgtgcatgctaa

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