Castanea sativa (European chestnut): 142626060
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Entry
142626060 CDS
T11266
Name
(RefSeq) small GTPase LIP1 isoform X1
KO
K07933
Rab-like protein 3
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
csaa04031
]
142626060
GTP-binding proteins [BR:
csaa04031
]
Small (monomeric) G-proteins
Unclassified
142626060
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GFIT
Motif
Pfam:
Roc
Ras
Arf
Gtr1_RagA
SRPRB
MMR_HSR1
AAA_16
GTP_EFTU
MCM
RsgA_GTPase
ATP-synt_ab
Septin
NACHT
Sigma54_activat
AAA
AAA_7
nSTAND1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
142626060
NCBI-ProteinID:
XP_075655948
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All DBs
Position
2:32418740..32424031
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AA seq
340 aa
AA seq
DB search
MFWRGERDRERESKEQNGGPLFGQVRVLVVGDSGVGKTSLVHLIIKGSSTTHPTQTIGCT
VGVKHITYGYSGSSSSSIKGDAERDFFVELWDVSGHDRYKDCRSLFYSQINGIIFVHDLS
QRRTKTSLQKWATEIAANGTFSAPLGSGGPFGLPVPFIVIGNKADVAAKEGTRGSSGNLV
DAARQWVEKQGLLPSSEELPLTESFPGSGGLLAAAKEARYDKEAVVKFFRSLIRRRYFSD
DLSAQTPWSISSVQRVSHRLDEDLSDEDQSYKNTSSLSGDPYKYNVLPPLPAQRNLTPPP
TLYPQQPVSVSESYSLPRFSLTGSSEFSSNARSKRSDINV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagaggggagcgtgatagggagagggagagcaaagagcaaaatggtggacca
ctttttggtcaggttcgagtacttgttgttggtgactcaggagttgggaaaacttctctt
gttcatttgattatcaaaggttcctccaccactcaccctactcaaacaattgggtgtact
gttggtgtgaagcacattacttatggatattccgggagctcttcaagtagcataaaaggt
gatgctgagagagatttctttgttgaactatgggatgtgtcaggccatgatcgttacaaa
gactgccggtctcttttctattcacaaattaatggtattatttttgttcatgatctctcc
cagagaaggacaaaaacaagcttgcagaaatgggcaactgagattgctgcaaatgggacc
ttttcagctcccttaggatctggaggtccctttggccttcctgtcccatttattgttatt
ggtaacaaagctgatgttgctgcaaaagagggtacaagaggaagcagtggcaatcttgta
gatgcagctcgccagtgggttgagaagcagggtttgcttccatccagtgaagaacttccg
ctgactgagagttttccaggcagtggaggccttcttgcagctgctaaagaagcaagatat
gacaaggaagctgtggtgaaattttttcgttcgctaatcagaagaagatacttttcagat
gacttatctgcacaaactccttggtctatttcttcagtgcagagagtctcacatcgttta
gatgaagatttaagtgacgaggatcagtcttataagaatacgagcagcttaagtggtgat
ccttacaaatacaacgtgcttcctccccttccagcacaacgcaatctcactccacctccc
acactttatcctcagcagccagtttcagtttcagaaagttacagcctcccaagattttcc
ctgactggctcttcagagttcagcagtaatgccagatcaaagcgctcagatattaacgtg
tga
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