Castanea sativa (European chestnut): 142626360
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Entry
142626360 CDS
T11266
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142626360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142626360
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142626360
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142626360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142626360
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142626360
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142626360
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142626360
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142626360
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142626360
Exosomal proteins of other body fluids (saliva and urine)
142626360
Exosomal proteins of breast cancer cells
142626360
Exosomal proteins of colorectal cancer cells
142626360
Exosomal proteins of bladder cancer cells
142626360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
MGAT2
Motif
Other DBs
NCBI-GeneID:
142626360
NCBI-ProteinID:
XP_075656298
LinkDB
All DBs
Position
2:23425112..23430063
Genome browser
AA seq
578 aa
AA seq
DB search
MYRFASSLASKARLARNTTQQIGSRLNSSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVASATNDAAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDCVVNHLKSSARKISKSDEIAQVGT
ISANGEREIGELIARAMERVGKEGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISSLNAIIKVLELALKRQRPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKSNLQDLAILTGGELITEELGMNLEKVDLDMLGSCKKVTISKDD
TVILDGAGDKKALEERCEQIRSAIENSTSDYDKEKLQERLGKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLETANFDQKIGVQIIQNALKT
PVYTIACNAGVEGAVVVGKLLEENDPDKGYDAAKGEYVDMVKAGIIDPVKVIRTALVDAA
SVSSLMTTTEAIVTEIPKDDKEAPAMGGGMGGMGGMDY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgcctcaagtctcgcctctaaagctcggcttgctaggaacacaacccag
cagattggtagtagattgaattctagtagaaactatgctgccaaagatataagatttggg
gtggaggcccgggctctgatgctaaagggtgtggaggagcttgctgatgctgttaaggtc
accatgggtcctaagggacgcaatgtggtaatcgaacagagttggggtgcccccaaagtg
acaaaagatggtgtcactgtagcaaagagcattgaattcaaggacaaagtcaagaatatt
ggtgctagccttgtgaagcaggttgcaagtgccaccaatgatgcagcaggggatgggacc
acatgtgccacagtacttacgcgggcaatatttaccgaagggtgcaaatcagttgccgca
gggatgaatgcaatggacctaagacgtggcattagcatggcggttgattgcgttgttaat
catttgaagagtagtgcacgaaagatcagcaaaagtgacgaaatagcacaggttgggaca
atatctgcaaatggagagagagaaattggtgagttgattgcaagggcaatggagagagtt
ggcaaagagggagtaatcacaattcaagatggaaaaacattgtacaatgagttggaagtt
gttgagggcatgaagctcgaccgtggttacatatccccttacttcattactaaccagaaa
aaccagaaatgtgaactggaagatcctctcattctaatccatgagaagaaaatctcaagt
ttaaatgccatcattaaagtattagaactggctttgaagagacaaaggccgttactaatt
gtttcagaagacgtggaaagtgaggctttggcaactctcattctcaataagcttcgtgct
ggaatcaaggtttgtgctatcaaagcccctggttttggtgaaaacaggaagtccaatctg
caggatcttgccattcttacaggaggcgaacttattactgaagagcttggcatgaatctt
gaaaaagtggatctggatatgcttggctcatgcaaaaaggttacaatatcaaaggatgac
actgttattcttgatggtgctggggacaagaaggctcttgaggaaagatgtgaacagatc
cggtccgcaattgaaaatagcacctctgattatgacaaagaaaaattacaagagagattg
ggaaagctttctggtggtgtagcagttttgaagattggaggagctagtgaagctgaagtt
agtgagaagaaggatagagtgaccgatgccttgaatgccacaaaggcagctgtcgaagag
ggtatagtgccaggtggtggcgttgctcttctttatgcatcaaaagagttggaaaagctg
gaaactgccaactttgatcagaagattggtgttcagattattcaaaatgctttgaagaca
cctgtgtacacaattgcttgtaatgctggagttgagggggctgttgttgttggtaagctg
ttggaagaaaatgaccctgacaaaggatatgatgcggccaaaggtgaatatgttgatatg
gtcaaagccggaataattgatccagtgaaagtgattagaactgctttggttgatgctgca
agtgtatcatctttgatgacgacaaccgaagctattgtgactgaaatacccaaggatgat
aaggaagctccggcaatgggaggtggcatgggtggcatgggtggcatggattattga
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