Castanea sativa (European chestnut): 142626473
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Entry
142626473 CDS
T11266
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142626473
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
142626473
NCBI-ProteinID:
XP_075656416
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Position
2:complement(42347063..42349533)
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AA seq
603 aa
AA seq
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MAVGESQSQVASPIRLGPTVCEKDAKALQFIDEMTMNTDAVQERVLEEILSQNAETEYLR
RYQLDGATDRETFKSKIPVVNYDDLQPYIQRIANGDRSPILSSSPISEFLTSSGTSAGER
KLMPTIYEEWDRRSKLYSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTPSGLLARPVLTG
YYKSDHFKTRPYDPYMVYTSPDEAILCADSFQSLYTQMLCGLLMREEVLRLGAVFASGLL
RAIRFLQLNWKELAHDISTGTLNSKITDPSLRECMSKIVKPNPELAEFITKECSGENWEG
IITRIWPNTKYLDVIVTGAMAQYRPTLDYYSAGLPQSCTMYASSECYFGLNLKPMCKPSE
VSYTIMPNMGYFEFLPHDPNAPALSRDSPPRLVDLADVEVGKEYELIITTYAGLCRYRVG
DILQVTGFHNSAPQFRFIRRKNVLLSIDSDKTDESELQKAIDNASELLKEFNTSVVEYTS
YGDTKSIPGHYVIYWELLVKDPGNSPTEEVLNQCCLVMEESMNSVYRQGRVADNSIGPLE
IRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPIMELLDSRIVSVHFSPALPHWTPQ
RSC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgttggggaatcacagtcacaggtcgcttcgccaattaggcttggccctactgtg
tgtgaaaaagacgcgaaggctcttcagttcatcgatgagatgacaatgaacactgacgct
gtccaggagagggttttggaagaaatactgagtcagaacgctgagactgagtatctcagg
cgataccaactcgatggagcaacggaccgtgaaacgttcaagtcgaaaatccccgtggtt
aactatgatgatctccagccttatatccaacgtatcgctaatggtgatcgctctccgatc
ttatcctctagtcccatctctgagttcctcaccagttctgggacttcggctggtgaaaga
aaattgatgccgacgatttatgaggagtgggatcgtcgctcgaaactgtacagccttctc
atgccggtgatgaacctatacgtcccgggtttagacaaagggaagggactttacttcttg
ttcgtgaaagctgaaacaaagactccaagtgggcttttggcacgtcccgtgctcaccggc
tattacaaaagtgaccatttcaagactaggccatatgatccctatatggtttacaccagc
ccagacgaggccattctttgtgcagactcgtttcaaagcttgtatactcagatgctttgt
ggcctcttgatgcgtgaggaggtcctccgacttggtgccgtgttcgcctctggcctactc
agagccataaggtttctacagcttaactggaaagaacttgcccatgacatctcaaccgga
actttaaactctaaaatcacagacccttctctcagagagtgcatgtccaaaattgtgaaa
ccaaacccagaacttgctgagttcataaccaaagagtgttccggagagaattgggaagga
ataatcacaagaatttggcccaacacaaaatatctggacgtgattgtaacaggtgctatg
gctcagtacagaccaacacttgactattatagtgctggattaccacaatcttgcactatg
tacgcttcttccgagtgctactttgggcttaacctcaagccaatgtgcaaaccttctgaa
gtgtcctacaccatcatgccaaacatgggttactttgagttcttgccacacgacccgaac
gctccggcgctttctcgtgactcacctccacgccttgtggaccttgccgacgtagaggtt
ggaaaagaatacgagctcataatcaccacctatgccggactctgccgataccgtgtgggt
gacatcctccaagtcaccgggttccacaactcggctcctcaattccggttcattagaaga
aagaacgtgttgttgagcatcgactcggacaagacggacgagtctgaattgcaaaaggcg
attgacaatgcatcagagctcctaaaagaattcaacactagtgtggttgagtacacaagc
tacggagacactaagtcaatcccaggacattatgttatttactgggagttgctagtgaag
gatccaggcaattcaccaactgaagaggttctgaaccaatgttgtttagtcatggaagag
tcaatgaactcggtttacagacaaggccgagtggcggacaactcaattggaccacttgag
atcagggtggttaaaaatggcacatttgaagagctcatggactatgcaatctctaggggt
gcgtctattaatcaatataaagcaccaaggtgcgtgagtttcacccccatcatggaactc
ctggactccagaatagtctcagtgcattttagccctgctttgccacattggaccccgcaa
cgaagttgttga
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