Castanea sativa (European chestnut): 142626803
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Entry
142626803 CDS
T11266
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142626803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142626803
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142626803
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142626803
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142626803
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142626803
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142626803
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142626803
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142626803
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142626803
Exosomal proteins of other body fluids (saliva and urine)
142626803
Exosomal proteins of breast cancer cells
142626803
Exosomal proteins of colorectal cancer cells
142626803
Exosomal proteins of bladder cancer cells
142626803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ApbA
Motif
Other DBs
NCBI-GeneID:
142626803
NCBI-ProteinID:
XP_075656632
LinkDB
All DBs
Position
3:34125818..34138217
Genome browser
AA seq
716 aa
AA seq
DB search
MASSATHISVLYFANPILPKRPSSPSMLNPKAMAKELHLNQDGSTTKKLQAGVDMVAELV
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGARTNDLAGD
GSTTSIILAQGLIAEGLKVIAAGMNPVQIARGIEKTAKALVSELKLMSREVEDNELADVA
AVSAGNDHAVGNMIADALHQVGKKGVVTIEKGKSTENSLQIVEGMQFDRGYLSPYFVTDR
QKMTVEFHNCKLLLVDKKITDPKEMFKILDSAVKEKYPIVIVAEGIEQEALAPVIRNKLR
GVLMAAAIKAPAFGERKSLYLDDIAILTGGTVIRDEMGLTLEKAGKEVLGSATKVLITKD
STLLVTDGSTCEAVEKRVSQIQGLVENTEENFQKKILNERIARLSGGIAILQVGAQSQVE
LKDKQLRIEDALNATKSAIEEGVVVGGGCCLLRLSTKVDGIKQLLDNEEQKIGAEIFRRA
LYYPARLIAKNAGVNGSVVIEKILSNDNINYGYNAARDCYEDLMKAGIIDPSKVVRCCLE
HATSVAKSFLTSSAVVVDIKELEPIPRRPPMPTSGMTTMKENKGKGLANEETVQPREDVL
TQSRPAVLEKKKTLSRMLDTGSLPSGRGNKKPRHGPSKPLVVETSPFVHLVVAKLLLMAK
TPLPEVSLSNPSLAGPLDSGAMILLKSERLAWDRFKQAVTNKDISICYDMSVKEFE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctgcaacccatatctctgttctttatttcgccaacccaatactgcccaaa
agaccttcctcaccttccatgttaaacccaaaagccatggccaaagagcttcacttgaac
caagatggttcaaccacaaaaaagcttcaggcaggggtggacatggtggctgaacttgtt
ggggtgactttgggtccaaaggggaggaatgtggtattgcagaacaagtacggacctcca
aaaattgtaaatgatggtgaaactgttctcaaagagattgaattggaggaccctttggag
aatgttggagttaaactggtgagacaagctggtgccagaacaaatgaccttgctggtgat
ggttccactacatcaatcattcttgctcagggtctaattgctgagggtttgaaggttatt
gctgctggtatgaatcctgtccaaattgctcgtgggattgagaagactgcaaaggccctt
gtttctgaactgaaattaatgtccagagaggttgaagataatgagcttgcagatgttgct
gcagttagtgcgggaaatgatcatgcggtgggaaacatgatagctgatgctcttcatcaa
gtgggaaagaagggtgtagtgacaattgaaaaaggaaaaagtaccgagaacagtttacaa
attgtagaaggaatgcaatttgatcgtggatatttgtctccttactttgtaactgatcga
caaaagatgacagtggagttccacaattgcaagttacttttggtcgacaaaaaaatcaca
gacccaaaggagatgtttaaaatattggacagtgcagttaaagagaagtatccaattgtg
atagttgcagagggcattgagcaggaagctctggctccagtaattagaaataagctcagg
ggtgtgctgatggcggctgctattaaggctcctgcctttggtgagcgcaagagcctctac
ttagatgacatcgccatcttgactggaggtactgtaatcagagatgagatgggtttgacc
cttgagaaggctggcaaggaggtattgggctccgctaccaaggttttgataaccaaggat
tctacattactagtcacagatgggagcacttgtgaagcggttgaaaagcgggtttctcaa
atccaggggcttgttgagaatactgaagaaaattttcaaaagaagatactaaatgaaaga
atagctaggttatcagggggaattgccattcttcaggtaggagcacaatcacaagttgag
ttgaaggataaacaactcaggattgaagatgctttgaatgcaaccaagtcagcaattgag
gaaggtgttgtagttggtgggggatgttgccttttgaggctatctacaaaggtagatggc
atcaaacaactattggacaatgaagaacagaagattggagctgagatcttccgaagagct
ttgtattatcctgcaagactgattgccaaaaatgcaggtgtaaatggcagtgtggttata
gaaaagattctttctaatgataatattaactatgggtacaacgctgcaagagactgttat
gaggatttgatgaaggcaggaattatagatccatcaaaggtagttagatgttgtttggag
catgcaacatctgtagccaagagttttctgacttcttctgcagttgtagttgacatcaag
gaactagagcccatcccaaggagaccaccaatgccaacgtcaggaatgacaactatgaag
gagaacaagggaaaaggtttggcaaacgaagaaactgtccaacctagggaagacgtcctc
acccaatctcgtccagctgttttagaaaagaaaaagactttgtccaggatgcttgatact
gggagtcttcctagcggtcgaggcaataaaaagccaagacatggtccgtccaagccctta
gttgtcgagactagcccttttgttcatcttgttgttgctaaactgctgttgatggcaaaa
acccctcttcctgaagtgagcttgtctaatccttctcttgctgggcctcttgacagtggt
gccatgatcctcttaaaaagtgaacgtcttgcttgggacaggtttaagcaggcagtgact
aataaagacatctctatctgctatgacatgtccgtgaaggaatttgaatga
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