Castanea sativa (European chestnut): 142627167
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Entry
142627167 CDS
T11266
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142627167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142627167
Ubiquitin system [BR:
csaa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
142627167
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
142627167
NCBI-ProteinID:
XP_075657083
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Position
3:complement(3396522..3400026)
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AA seq
458 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGNV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaaaactctcactggaaagaccataactctcgaggtcgagagctct
gatacaatcgataatgtcaaagcaaaaatacaggacaaggagggaatcccaccagaccag
cagaggctgatctttgcaggcaaacagttggaggatggtcgtactttggctgattacaac
atccagaaagaatccaccctccacttggttcttcgtttgagaggtgggatgcagattttt
gtcaagacactcaccggaaagaccattactcttgaagttgagagttctgatacaatagat
aatgtgaaggctaaaattcaggacaaagaaggaattcccccagatcagcagaggctgatt
ttcgctggaaagcagcttgaggatggccgaactttggccgattacaacattcagaaggaa
tctacactccaccttgttctccgcctcaggggtggtatgcagatcttcgttaaaactctt
acaggaaagacgatcactttggaagttgaaagctcggacacaattgataatgtcaaagcg
aagatacaagacaaggagggtatccctccagatcagcagaggctgatctttgctggaaag
cagcttgaggatggtcggacattggccgactacaacattcagaaagagtccaccttgcat
ttggtcctccgcctccgtggtggaatgcaaatctttgtaaagacccttactggcaagacc
atcacccttgaggtcgagagctctgatacaattgacaatgttaaggcaaaaattcaggat
aaagaaggtattccaccagaccaacagaggctgatattcgctggaaaacagcttgaggat
ggcaggactttggctgactataacatccagaaagagtctactcttcatttggttctcagg
cttcgtggaggaatgcagatttttgtcaagactctgactggaaagaccatcacccttgag
gtggagagctctgataccatagataatgttaaagcaaagattcaagataaggaagggatt
cctccggatcagcagaggctcatctttgctggaaaacaacttgaggatggccgcactctg
gctgattacaatattcagaaggaatcaacactccatcttgttctccgtcttcgtggtggt
atgcagatctttgtgaagacactgacgggcaagacaatcacacttgaggtggagagttct
gataccatcgacaatgtgaaggcaaagattcaggacaaggaggggatcccacctgatcag
cagaggctcatctttgcgggaaagcagcttgaggatggtcgaacacttgcagactacaat
atccagaaagagagcaccctgcatcttgttctccgcctccgtggtggtaatgtttag
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