Castanea sativa (European chestnut): 142627193
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Entry
142627193 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142627193 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142627193
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
142627193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_12
TPR_11
TPR_10
TPR_16
Coatomer_E
TPR_9
ANAPC3
ARM_TT21_C
HAGH_C
Motif
Other DBs
NCBI-GeneID:
142627193
NCBI-ProteinID:
XP_075657112
LinkDB
All DBs
Position
3:complement(3381740..3389076)
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AA seq
466 aa
AA seq
DB search
MSRNPSKHGRDQAMDFQGFLNDLQDWELSLKDKDKKMKPQAPQKEKSVSSRNIGKTPSVD
YSSNSGQFDYMRNYGVDSTSTSLMTEESFPDAASEKELGNEYFKQKKFKEAIECYSRSIA
FSPTAVAYANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKYKECFE
DAEFALRLEPDNQEIKKQYTEARSLYDKEILQVSGPPRSSGQGMQKVVSSGGKVNGHSVH
PGPNNIQKSGVPAVQDHTKNNVEQFPGRASVEERDNKSVNSVSRIEEQEVDGSRLVAIQS
SKVNSIKKNHRTGKQELMKSVQELASQAASRAKAEAAKNITPPKSAYQFEASWRGLSDDC
ALQARLLKAVSPTALPQIFKNALSASLLVDIIKCVATFFTEEMDLAIRYIENLTNVSRFD
LLIMCLSSTDRDDLHKIWDEVFCSEATPIEYAEMLDKLRSRYCLNR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggaatcccagcaagcatggccgtgatcaagctatggatttccaggggtttttg
aatgacttgcaggattgggagctttctctcaaggacaaagacaagaagatgaagcctcaa
gctcctcagaaggaaaaatcggtttcttctcggaacattggaaaaactccctcagtcgat
tattctagtaattcaggacaatttgattacatgaggaactatggagttgattctacatca
actagcctcatgactgaagagagttttcctgatgctgcttcagagaaagaactgggcaat
gagtattttaaacagaagaagtttaaggaagctatcgaatgctattcaagaagcattgcc
ttttcaccaacagcagtggcttatgcaaatagggcgatggcctatctcaaaatcagaaga
ttccaagaggctgaggatgattgtacagaggccttgaacttagatgatcgctacataaaa
gcatactcacgtcgagctacagctagaaaagaacttgggaaatataaagaatgctttgag
gatgctgagtttgccctgaggttggagcctgacaaccaagaaattaagaagcagtacact
gaggccagatcattgtatgacaaagagattcttcaggtgtctggaccaccaagaagttct
gggcaaggaatgcagaaagtagtaagttcagggggcaaggttaatggacatagtgttcat
ccaggaccaaataatattcaaaagtcaggagtgcctgccgttcaagatcacaccaagaac
aatgttgaacagtttcctgggagggcatctgtggaggaaagagataacaaaagtgtgaat
tctgttagtagaatagaagaacaagaagttgatggctctcgtctagttgctattcagagt
tcaaaagtgaacagcattaagaaaaatcacagaacaggaaagcaagagctgatgaagtca
gtgcaagagcttgcttctcaagcagcttctcgagccaaggctgaagctgcaaaaaacatc
acaccaccaaagtcggcttatcaatttgaggcctcttggcggggactctctgatgactgt
gctctacaggctcgtttattgaaagctgtatctccaactgcattgccacagatattcaaa
aatgctttgtctgcttccctactagttgacattattaaatgtgttgccacctttttcact
gaagaaatggatctggctatcagatacatagaaaatttaaccaatgtctcaagatttgac
ttgctcatcatgtgcctttcatctacagatagagatgatctccacaagatttgggatgaa
gtattttgtagcgaggcaacgccaattgagtatgcggagatgcttgataaacttcgttca
agatactgcctcaaccggtga
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