Castanea sativa (European chestnut): 142627338
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Entry
142627338 CDS
T11266
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142627338
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
142627338
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
142627338
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HopW1-1
Motif
Other DBs
NCBI-GeneID:
142627338
NCBI-ProteinID:
XP_075657293
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Position
3:5819171..5827805
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AA seq
624 aa
AA seq
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MDDHDLELEKARLISLALDFGFNEESAKKCLDRMVQLYGEDGCDFITVEHCGDDFLAALA
ESMQDTEEWDDLQAIESEACGTLNNLFDKDVLNSHEVDNDGNGRNYINVIDDSPEKHPNF
MELDSSSDSEDLDFGIRKEKNVKSTPSFTDWSSPVLNEGSSKTCSKSMDCRSSITQGSIP
SVSHKKHCSRTSKVEHETLSYEVLQALDDFELANVVIFGNRTFRPLQHQACKAAVAKRDC
FILMPTGGGKSLCYQLPATLQPGVTVIVSPLLSLIQDQIITLNLKYGIPATFLNSQQTAS
QAAAVLQELRQDKPSCKLLYVTPERIAGNLSFLEILKCLHRKGQLAGFVVDEAHCVSQWG
HDFRPDYRGLGCLKQNFPDVPVMALTATATHSVREDIMKALRIPRALVLERSFDRPNLKY
EVIGKTKEPLKQLGQLLMDCFKNQSGIVYCLSKSECAEVSKFLNEKCKIKTEYYHAGLAP
RQRVAVQKKWHMGEVHIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDDH
PAVCIALYQKKDFSRVVCMLRNGLKYKKESFKTAMTQAQKMQQYCELKADCRRQALLNHF
GESFDRKACKYGSNPCDNCLKTSS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccacgatttggaattggagaaagctcggttgataagcttggctcttgatttt
gggttcaatgaagaatcagcaaagaagtgcttggatcgtatggttcaactctatggtgaa
gatggctgtgattttatcactgtggagcactgtggtgatgatttccttgcggccttagct
gaatcgatgcaagacactgaggaatgggatgatttacaagccattgagtcagaagcttgt
ggaactttgaataacttgtttgacaaagatgttctcaatagtcatgaagtggataatgac
ggcaatggaagaaactacatcaatgttatagatgattcacccgaaaaacatccaaatttt
atggagttggattcctctagtgacagtgaagacttagattttggaattcgaaaggaaaaa
aatgtcaaatctaccccttcttttactgattggagcagtcctgttctcaatgaaggttca
agtaaaacttgttcaaaatctatggattgtaggagcagcatcactcaaggttcaatccca
tcagtttctcataaaaaacattgctcccgaacatcaaaagtggaacatgagactctcagt
tatgaagtactacaggctttggatgattttgaattggcaaatgtcgtaatatttggtaac
aggacattccgcccattgcagcatcaggcttgtaaagcagctgtagcaaagagagattgc
tttattcttatgcctactggaggtggtaaaagtctatgttaccagcttccagcaactctg
caaccaggtgttacagttattgtttctcccttactctccctcattcaggatcaaataatt
actctgaacctcaagtatggaataccagcaacttttttaaattctcaacaaactgcttcc
caagcagcagctgtcctccaagagctaaggcaagataaaccatcatgcaagctcttatat
gtaactcctgagaggattgctgggaacttatcatttcttgagattctcaaatgcctgcat
cggaagggacaactagcaggttttgttgttgatgaagcacactgtgtaagtcaatgggga
cacgattttcgtccagattatcgcgggttaggatgtcttaagcagaatttcccagatgtt
cctgtgatggcattgactgccacagcaacccattcagttcgtgaggacataatgaaagct
ttaagaatcccccgcgctctggttctcgaaaggagctttgatagacccaacttaaagtac
gaagttattggaaagaccaaggagccattgaagcagcttggacaattactaatggattgc
ttcaagaatcagtctggaattgtgtactgcctttcaaaaagtgaatgtgctgaggtttca
aagttcttaaatgagaaatgtaagattaagacagaatattaccatgctggtttggcacct
cgccagagagttgctgttcaaaagaagtggcacatgggagaggtccatattgtatgtgct
actattgcttttggaatgggaatagacaaaccagatgttcgatttgtcatccacaataca
atgtccaaatcgattgaaagctattatcaagaatcaggtagggcgggaagagatgatcac
cctgcggtatgcattgctctatatcagaagaaggattttagtcgggttgtgtgtatgttg
cggaatgggcttaaatacaaaaaagaaagctttaagacagcaatgactcaagctcagaaa
atgcaacagtattgtgaactgaaggctgactgtcggagacaggccttactcaatcacttt
ggagaatcttttgaccggaaagcctgcaaatatggttctaatccttgtgataactgtctc
aagacttcctcgtga
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