Castanea sativa (European chestnut): 142627736
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Entry
142627736 CDS
T11266
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00500
Starch and sucrose metabolism
csaa01100
Metabolic pathways
csaa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
142627736
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
142627736
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
142627736
NCBI-ProteinID:
XP_075657715
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Position
3:52256932..52268238
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AA seq
939 aa
AA seq
DB search
MSSVSIGSLQHHSLRENPKYSPKSKAFKPCSLNCSPRTQTQAKLFFHSRRFCNFFRAPKH
SHVVVVKAASTTETAVVQTSESADLFFKETFPLKRTDTSVKREGNEVHKKLKIVEGKIFV
RLDQVKNSQIWQLTVGCNLPGEWILHWGVSYVGDVGSEWDQPPTQMRPPGSIPIKDYAIE
TPMKKSSSSGGDGFHEVKIDLSPNSAIAAINFVLKDGETGAWYQHRGRDFKVPLVDYVQG
DGPDGNIAGEKRGFGIWPGAFGQLSSWILKGEVLTTTGPDGSTNSGDPKQESRSLERFYD
EQPIAKQVSVDNSVTVSVRKCPETAKNHIHVETDLPGDVVIHWGVCLDGAKKWEIPSAPY
PPETIAFKDKALRTRLQPKEGGDGCWGSFTVEEGLEGFLFVLKLNEKTWLKCMGNDFYIP
LSSSSLSARSTQSLSGGQSLSGGQSLSGGTQIPEKSAKENQEGSISIYTNGIINEIRNLV
GDISSEKSQKTKSKEVQESILREIEKLAAEAYSIFRSSVPTFTEEAVVESEEQKPPVKIC
SGTGTGFEILCQGFNWESHKSGRWFMELKEKAAELSSIGFTVIWLPPPTESISPEGYMPR
DLYNLNSRYGNIDQLKEAVKKFHEVGIKVLGDAVLNHRCAHSQNQNGVWNIYGGRLNWDD
RAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLCWLRKEIGYDGWRLDFV
RGFWGGYVKDYIDASEPLFAVGEYWDSLSYTYGEMDHNQDAHRQRIVDWINATNGTAGAF
DVTTKGILHAALERCEYWRLSDSKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPRGK
EMQGYAYILTHPGTPTVFYDHIFSHYRPEIEALISIRNRNKIHCRSIVKITKAERDVYAA
IVDEKVAVKIGPGHYEPPSGQQKWSSAYEGKDYKVWESS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgttagcataggttctctacagcaccacagtcttagagagaaccctaagtac
agtcccaaatccaaagcattcaaaccttgttctttgaactgctcgcctcggactcagact
caggctaagctcttcttccattctcgacgcttctgcaacttcttcagagctccaaagcat
tctcatgttgttgttgttaaagctgcctctactaccgaaaccgctgtcgttcagacctcc
gaatccgccgaccttttcttcaaggagactttccctctcaagcgaactgatacgagtgta
aagagagaaggaaatgaagtgcataaaaaactcaaaatcgtggagggaaagatcttcgtc
cgattagatcaggtgaaaaatagtcagatttggcagctaactgtaggttgtaatcttcct
ggggaatggattcttcactggggagtttcgtatgtcggtgatgttggcagtgaatgggat
caacctcctactcaaatgagacccccaggttcaattcccatcaaggactatgcaatagag
acacccatgaagaaatcatcgtcatcgggaggagatggatttcacgaagtgaagattgat
ctcagccccaatagtgcaattgctgcaataaattttgttttgaaggacggtgaaactgga
gcttggtatcagcacagagggagagattttaaggtgcctcttgtggactatgttcaaggt
gatgggcctgatggcaatattgcaggagaaaaaaggggcttcggtatatggccaggggct
tttggccagctatctagctggatcctcaaaggagaagtgttgactactactggtccagac
ggcagcaccaattccggagatcctaaacaagaaagtaggagcctagaaaggttttatgat
gagcagcccattgcaaaacaagtttctgttgataactcggtcactgtttctgttagaaag
tgccctgagactgctaaaaatcatatacatgtagaaactgatctacctggagatgttgtt
attcactggggagtttgtctagatggtgctaaaaagtgggaaattccgtctgccccatat
ccaccagaaacaatagcattcaaggacaaggctttgcggactcgattacagccaaaagag
ggcggtgatggttgttggggatcgtttactgtagaagaaggacttgaaggatttcttttt
gtgctcaagctaaatgaaaaaacttggttgaaatgtatgggaaatgacttctacatcccc
ctctcaagttctagcttgtctgctagatccactcagagtctatctggaggtcagagtcta
tctggaggtcagagtctatctggaggcacacagatacctgaaaagagtgcaaaagaaaat
caagaaggatctattagtatatatactaatggaataattaatgaaataaggaacttggta
ggtgacatttcctctgagaagagtcaaaagaccaaaagtaaagaagttcaagaaagtatt
cttcgtgaaattgaaaaactggctgctgaagcctatagtatcttcagaagctctgttccg
acattcacagaggaagctgttgttgaatctgaggaacaaaaacctcctgtcaaaatatgc
tcagggacaggcacagggtttgaaatattgtgccaaggatttaactgggaatctcataaa
tctggaagatggttcatggagctgaaagaaaaagctgcagaattatcttcaattggtttc
actgtgatatggttaccaccacctacagaatccatatcacctgaaggatatatgccaagg
gatttatataatctaaattccagatatggaaatattgatcagctgaaagaagctgtgaag
aaatttcatgaagttggtattaaagttcttggagatgctgtcttgaatcaccgctgtgca
cactcccaaaatcagaatggtgtttggaatatctatggtggccgtttaaattgggatgat
cgtgcagttgttgcagatgatccacattttcagggcagaggcaacaagagtagcggagat
aatttccacgctgctccaaacattgatcattcacaagaatttgtgaggaaggatctaaaa
gaatggttatgttggctgaggaaagaaattgggtatgatggatggaggcttgattttgtc
agaggattttggggtggttatgtcaaagattatatagatgcaagtgaacctctctttgct
gttggggagtattgggattccctcagttatacatatggtgaaatggatcacaatcaagat
gcgcataggcagagaattgttgactggatcaacgcaactaatggaactgctggtgcattt
gatgtcacgacgaaagggattcttcatgcagcactggaaagatgtgaatattggcgatta
tcagattcaaagggaaagcctcctggggttgttggatggtggccatcgcgtgctgttacc
tttatagagaatcatgatactggttctactcagggccattggagattcccacgtggaaag
gaaatgcaaggatatgcttatattctgactcatcctggaacacccacagtgttctacgat
cacattttctctcactaccgacctgaaatcgaagctctaatctctataagaaaccggaac
aaaatccattgtcgcagtatagttaaaattactaaggctgaaagggatgtgtatgcggcc
attgttgatgaaaaagttgcagttaagataggaccaggtcattatgaacccccaagtggg
cagcaaaaatggtcttcagcctacgagggaaaggattacaaggtctgggaatcatcttaa
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