Castanea sativa (European chestnut): 142627971
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Entry
142627971 CDS
T11266
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142627971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142627971
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142627971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
142627971
NCBI-ProteinID:
XP_075657996
LinkDB
All DBs
Position
3
Genome browser
AA seq
1488 aa
AA seq
DB search
MAREEEIVMRDVNNAGLVVSDRIGREVASQLDLEEALEASRYASHPYTTHPREWPPLVEV
VDTWELPPVLVERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYCGE
EQAICAVGLAKSKPGVFVEAIQYLLILATPVELILVGVCCSRGGDGTDPFAEVSLQPLPE
YTIPSDGVTMTCITCTDKGRIFLAGRDGHIYELHYTTGSGWQKRCRKVCLTAGLGSVISR
WVVPNVFKFGAVDPIVEMVFDNEREILYARTEEMKLQVFVVGPNGDGPLKKVSEEKNLIN
QRDAHYGGRQSTGLRAANRATKPSIVCISPLSVLESKWLHLVAVLSDGRRMYLSTSSSSG
NLGGFNSNHHKPSCLKVVTTRPSPPLGVSSGLAFGSLAGRSQNEDLSLKVETAYYSAGTF
LLSDSSPATTSSLLIVSRDSSTQSSLSGSLGTSTRSSRALRESVSSLPVEGRMLFVADVL
PLPDTAATVQSIYSELEFGGFGNSDESCEKASGKLWARGDLSTQHILPRRRIIIFSTMGM
MELVFNRPVDILRRLLESSSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVVS
EKAAEAFEDPRVVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSR
LLFPLWELPVMVVKGGLGSTDAFSENGVVVCRLSVGAMQVLESKIRSLEKFLRSRRNQRR
GLYGCVAGLGDLTGSILYGTGSELGADDRSMVRNLFGSYSRNVDSSGGGTTNKRQRLQYN
PAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLVQGFDANLRQALVQLTFHQL
VCSEEGDRLATRLISALMEYYTGPDGRGTVDDISAKLREGCPSYYKEPDYKFFLAVECLE
RAAITPDAEEKENLAREAFNYLSKVPESADLRTVCKRFEDLRFYEAVVRLPLQKAQALDP
AGDAYNEQIDAATREHALAQREQCYEIIISALRSLKGDTSQREFGSPVRPATATSFLDQS
SRKKYICQIVQLGVQSPDRIFHEYLYRAMIDLGLENELLEYGGPDLVPFLQSAGREPIQE
VRAVSAVTSATSFMGQSGAPIPSNRAKYFDLLARYYVLKRQHVLAAHILGRLAERRSTDS
GDVLTLEQRCRYLSNAVLQAKNASNSNGLAGSTQAALDSGMLDLLEGKLAVLRFQIKIKE
ELEAIASRLEASPGASESMQNDPPENDLTADASIANAAREKAKELSLELKSITQLYNEYA
VPFELWEICLEMLYFANYSGDADSSIVRETWARLIDQALSTGGISEACSVLKRVGSHIYP
GDGAVLSLDTLCLHLEKAALERSETGVESVGDEDVPRALLAACKGATEPVLNTYDQLLSN
GAILPSPKLKLRLLRSVLVVLREWAMSVFAQRIGTSATGASLILGGTFSLEQTAIINQGV
RDKITSAANRYMTEVRRLALPQSQTEAVYRGFRELEESLISPFSFDRF
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgaagaagagatcgtcatgcgcgatgtcaacaatgccggtctcgtcgtcagc
gatcgcattggccgagaagtcgcgtcgcagctcgacctggaagaagccctagaagcttcc
agatacgctagccacccttatacaactcatcccagagagtggcctcctttggttgaggtg
gtggatacttgggaattgcctcccgtacttgttgaaagatataatgcagctggtggggaa
ggaactgctttatgtggaatatttcctgagatacgaagggcatgggcctcagtagataat
tctttgtttctttggcggtttgacaagtgggatggtcaatgtcctgaatactgtggggag
gaacaagctatatgtgctgtcggtcttgccaaatctaaacctggtgtttttgttgaagct
atccaatatcttttaattttagcaacacctgttgagttaattcttgtaggagtatgttgc
tctagagggggtgatggtacagatccattcgcggaggtttcattacagcctttgccagag
tacacaataccatctgatggagtcaccatgacttgtattacatgtactgataagggtcgt
attttcctggctgggcgtgatggccacatttatgagttgcattacacaactggttcaggc
tggcaaaagcgttgtcgtaaagtctgccttactgctggtttaggaagtgtcatttcaaga
tgggttgtgccaaatgtatttaagtttggagctgttgaccccattgtcgaaatggttttt
gataatgaaagagaaattttatatgcacgtactgaagagatgaaacttcaggtttttgtt
gtggggccaaatggtgatggtccactcaagaaagtttcagaagaaaagaatctgatcaat
cagagggatgcacattatggaggtagacaatcaactggattgagagctgcaaatcgggcg
acaaaaccatcaattgtctgcatttcacctctatctgtgctggaatcaaagtggctgcac
cttgttgctgttttgtctgatggaagaaggatgtacctttccacttcttcatctagtgga
aacttgggtggatttaattcaaaccatcataaacctagctgtttgaaagttgtgacaacc
aggccttctccacctttgggggtcagcagtggacttgcttttggatctcttgcaggtagg
tctcagaatgaggatctctcactgaaggttgagacagcatattattctgctggaactttt
ctcctttctgattcgtcaccagcgaccacgtcttctcttctcattgtgagcagagattca
agcacacaatcatctctatcaggtagtctagggacaagtacaaggagttctcgtgcatta
cgggaatctgtatcttctctaccagttgaaggtcgcatgctttttgtggcagatgtctta
cccttgccagatactgcagctactgtgcagtctatatattcagaacttgaatttggaggt
tttggaaactcggatgagtcttgtgaaaaagcatctggaaaactttgggccagaggtgac
ctttcaactcaacatatattgccaaggaggagaattatcattttcagtaccatgggcatg
atggaattagtttttaataggcctgtggacattttaaggaggttgttagagtccagctca
ccaaggtcaattctagaagatttcttcaatcgttttggggctggtgaggcagctgcaatg
tgtttaatgcttgctgcaaggatagtccattctgaaaaccttatcagcaatgttgtttcg
gagaaggcggctgaagcttttgaggatccaagagttgttggaatgccacaacttgaaggt
agtagtgcattgtcaaacactagaacagctgctgggggatttagcatgggtcaggttgtt
caggaggccgagcctgtgttttcaggtgcacatgaagggctctgcttgtgctcatcaagg
ctgctttttcctctgtgggaactacctgtcatggttgtaaaaggtggtttaggttcgact
gatgctttttctgaaaatggggtagttgtatgcagactttctgtcggggctatgcaagtc
ctagagagcaagattcgctctttagagaagtttctaaggtctagaaggaaccagaggagg
ggtctttatggctgtgtagctggtttaggagacttgactggctctattctttatggaacc
ggttccgaattaggtgctgatgaccggagtatggtgagaaacttgtttggttcttattca
cgaaatgttgattctagtggaggcgggactactaataaaagacaaagattacagtataat
cctgcagaattggctgccatggaggtgagggcaatggaatgtattaggcagttgcttctt
agatctggtgaagccctgttcttactccaacttctctctcagcatcatgtgacacgctta
gttcagggatttgatgcaaatctacgtcaggcattagttcaattgacattccatcaactt
gtttgctctgaggagggtgaccgccttgccacgaggcttatatctgctctaatggagtat
tatactggtcctgatggcagggggacagtagatgatattagtgcaaaattaagggaaggt
tgtcccagctattacaaggagcctgattataagtttttcttagctgtggaatgtcttgag
agagcggctataactccagatgctgaggaaaaagagaatcttgctagagaggccttcaat
tacttaagtaaagttccagaatctgctgatctacgaactgtctgcaaacggtttgaggat
ttaagattttatgaagctgtagtccgcttacctttgcagaaggcacaggctcttgaccct
gcaggtgatgcttacaatgagcaaattgatgcagctactcgagaacatgcgcttgctcag
cgtgaacagtgctatgagataattatcagtgctttgcgttctctgaaaggtgatacttca
caaagggaatttggatctcctgttaggcctgctactgctacatctttccttgatcagtcc
tctcggaagaaatatatttgccagatcgttcaacttggtgttcaatcaccagatagaata
tttcacgagtacttgtatcgagctatgattgatttgggccttgaaaatgagttgttggag
tatggaggtcctgatttggtcccttttctgcaaagcgctggtcgtgaacctatacaagag
gttcgagctgtttctgctgtgacgtcagcaacttcttttatgggtcaatcaggagcacct
atcccatctaaccgagccaagtactttgatcttttggcacgatattatgtcttgaagcgg
cagcatgtgcttgcagctcatatattgggaagattggctgagaggcgctcaaccgattcg
ggggatgttcttactctagaacagaggtgtcggtaccttagcaatgcagttctacaggca
aagaatgcaagtaatagtaacggtctggcaggttctactcaagctgctcttgacagtgga
atgctagatctgcttgaagggaagcttgctgttcttcggtttcagataaagatcaaagag
gaattggaggctatagcttctaggttagaagcttcgccaggtgcatctgaatctatgcaa
aatgatccccctgaaaacgatttgactgctgatgccagtattgctaatgctgcacgtgaa
aaggctaaagagctatctttagaattaaagagcataactcaactctataatgaatatgct
gttccgtttgagctctgggagatatgtctggaaatgctgtactttgcaaactactcaggt
gatgctgatagtagcattgtaagagaaacctgggctagactaattgatcaagctctttca
acgggtggaatttctgaagcgtgttctgtactaaaaagagttggttcacacatttatcct
ggagatggagctgttttatctttggacactctctgtcttcaccttgagaaggctgcactg
gagagatcagaaacaggggttgaatctgttggagacgaagacgttccaagagctcttctt
gctgcttgcaagggtgcaacagaacctgtgctgaacacttacgaccaattgttatcaaat
ggggctattttgccatctccaaagctcaagttacgccttctccgatcagtgctagtggtg
cttcgtgagtgggcaatgtctgtatttgcacagagaattggtacaagtgccactggagct
tctttaatattaggtggaacattctcactggagcaaacagctatcattaaccaaggagtt
cgagataagatcacaagtgcagctaacaggtatatgactgaggtcaggaggttggccctt
ccgcagagtcagactgaggctgtttaccgaggttttcgggaactagaagaatcactaata
agtcctttttcttttgatcggttttga
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