Castanea sativa (European chestnut): 142627973
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Entry
142627973 CDS
T11266
Name
(RefSeq) mRNA export factor GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03013
Nucleocytoplasmic transport
csaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142627973
03015 mRNA surveillance pathway
142627973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142627973
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142627973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
142627973
NCBI-ProteinID:
XP_075657999
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Position
3:44550576..44565374
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AA seq
635 aa
AA seq
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MGVIKLEPRCAQRIDGMAIDPEPNWKFDSLLSELNSLETKLSSSTNVPAPFAKSWPRYIS
NGKSSGKSCKPFIMRVSEDEIYDTESEGEEDRSLVAATRFNCDAIYLSSDSDDESTFKDQ
SFLMDEVQIVEGALCELAHEHHLEDKEEIRNKISALETDLRSGSEKSTSALTQVEKYREA
RNEMDRKLDTQYQRKIAEALDNHLTAVQRDHELRSQIEERKIRSDAAYEEAKRREKALQE
EKIRQEKSKAESEARLRAEEAIRAALEAERRAALEAERRAVKETAERQAIETSTRVAARP
AQEEDAGRQMNANSAKKSQSASNVLWAAESALNLEQARIQKLKEVDEGNQALRLTYNKDL
SSYEKLIGRLIRQISGSTEVVREKSREIIKIFNDRHCPQSVMVAAFAKLVVSRCTSPNTD
AFACGHVIVLVTSQVPHAMDLLLAEFHRACIYTVPKHITYSESAFECEEAYYQALGYRVS
DGKLESTKDYLTRLASYMELYGALIQTEVQGVQNTHGLKEGWAWIARFLNTLPANRYTAV
ALSAFLKMAGFALFRKYKSQFMKVLSNISNNFLQELKACEDPGLNATILEIQSYLEDKRF
LKEPVGRALQSSLLSTVSIPEGPDPDYHRSSGRYY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaataaagttggaacctcgttgtgcccaaagaattgatggaatggcaatcgac
cctgaacccaattggaagtttgattctttattatcagagcttaattcattggaaacaaag
ctcagttcctctactaatgttcctgcgcctttcgcgaaatcatggccaagatatatctcc
aatgggaagagcagtggtaaaagttgtaagccttttataatgcgtgtgtctgaggatgag
atttacgacactgaaagcgaaggtgaggaggatcgaagtttggtggctgcaacacggttc
aattgtgatgcaatttatttgagtagtgattctgatgatgagtcaacttttaaagaccaa
tccttcttaatggatgaagtgcaaatagttgaaggtgctttgtgtgagctagcccatgaa
catcaccttgaagataaggaggagattaggaacaaaatttctgccttagagacagattta
aggagtggaagtgagaagtctacttctgcccttactcaagttgagaaatacagagaagca
agaaatgaaatggataggaaacttgatactcaataccagcgcaagattgcagaagcactt
gataatcacttgactgctgttcagcgggaccatgaattgagatcacaaatagaagaaaga
aaaataagaagtgatgcagcttatgaagaggccaaaagaagggaaaaggctctccaagaa
gaaaaaatacgccaagaaaagtctaaagcagaatctgaggccagacttagagctgaggaa
gcaataagggctgctttggaagctgagagaagagcagctttggaagctgagagaagagct
gtgaaagaaactgcagaaaggcaagctattgagacctcaacaagagttgctgctaggcca
gcacaagaagaagatgcaggacgccaaatgaatgctaattcagcaaaaaaatcacaatca
gcaagtaatgtactctgggcagcagaaagtgctctaaatttagaacaggcaagaatacag
aaacttaaagaggtagatgaaggaaaccaggctctgaggttgacttataataaggatttg
agcagctatgaaaagcttatcggtaggttgataagacaaataagtggatcaacggaggtt
gtccgtgaaaagtcacgtgaaattattaagattttcaatgatcgtcattgcccgcaatct
gtcatggtggcagcatttgcaaagctggttgtctcccgttgtacaagccctaatactgat
gcttttgcgtgtgggcatgtcattgttcttgttacctcacaggttccacatgcaatggat
cttcttctagctgagttccacagagcctgcatttacactgttccaaagcatataacatat
tcagagtcggcatttgaatgtgaagaggcttattatcaggctcttggataccgagtaagt
gatggaaagcttgagagcactaaggactatttgacacggttagcatcctacatggaattg
tatggggctctaattcagacagaagtacagggtgtccagaacacacatggcctgaaagaa
ggctgggcatggattgcaaggttcttaaatactttgcctgccaatagatatacagcggta
gcactgagtgccttcctgaagatggcagggtttgctctcttcagaaaatataaatctcag
ttcatgaaggtactgagcaacatctcgaacaactttctgcaagaattgaaagcatgtgaa
gatccagggttaaatgcaaccattctggagattcaatcctacttggaggataagaggttc
cttaaggagccagtgggaagggccctgcaaagttctttgctttcaactgttagtattcca
gaaggaccagatccagattaccaccggtcgtcgggtagatattactag
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