Castanea sativa (European chestnut): 142628053
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Entry
142628053 CDS
T11266
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142628053
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csaa01009
]
142628053
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142628053
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142628053
03041 Spliceosome [BR:
csaa03041
]
142628053
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
142628053
Protein phosphatases and associated proteins [BR:
csaa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
142628053
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142628053
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142628053
Spliceosome [BR:
csaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142628053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
142628053
NCBI-ProteinID:
XP_075658120
LinkDB
All DBs
Position
3:7663099..7666844
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AA seq
326 aa
AA seq
DB search
MMMMTMEGMMDKGVLDDIIRRLLEGKGGKQVQLSEGEIRQLCVNARQIFLSQPNLLEIHA
PVRICGDIHGQYQDLLRLFEYGGYPPNANYLFLGDYVDRGKQSLETICLLLAYKIRYPDR
VYMLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLS
PELQNLDQIKEISRPTDVPDSGLLCDLLWSDPDQNVLGWAESDRGVSCTFGPDKVAEFLD
KNDLDLICRGHQVVEDGYEFFAKRKLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILK
PKEARASASGSNTMVKLKKPPKIGTI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgacaatggagggaatgatggataagggtgtgttggatgatataataagg
aggctattggaagggaaaggaggaaaacaggtgcagctatctgagggggagatccgtcaa
ctctgtgtcaacgccaggcaaatcttcctctcacagcctaatctcctcgagattcatgcc
ccggttcgcatatgcggtgacatacatgggcaataccaagacctactaaggctttttgaa
tatggtggctaccctcctaatgcaaattacctctttcttggggattatgttgatagaggc
aagcaaagtttggagacaatatgtttgctcctggcatacaaaataagatatcctgacaga
gtctacatgttgagaggaaaccatgaagacgcaaagatcaatcggatttatgggttttat
gacgagtgtaaacggaggtttaatgttaggctatggaaaatatttaccgactgcttcaac
tgtttgcctgtggctgcacttattgatggcaagatactttgtatgcacgggggactgtct
ccggagttgcaaaatttggatcaaataaaggagatttcaaggcctactgatgtaccagat
agtggtctcctctgtgatctgctatggtctgatcctgatcaaaatgttctgggatgggca
gagagtgatcgaggtgtttcatgtacctttggacctgataaggtcgccgagttcttggac
aagaatgaccttgatctcatttgtagaggtcatcaggtggtggaggatggatatgagttt
ttcgctaaacgaaaattggtcacaatattttcagctccaaactatggtggagagtttgat
aatgcaggtgctctattgagtgttgatgaatctttagtgtgttcttttgagatattgaaa
ccaaaggaggctagagcatcagcaagcgggtctaatacaatggtgaaacttaaaaagcca
cctaaaattggaaccatctga
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