Castanea sativa (European chestnut): 142628288
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Entry
142628288 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142628288
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142628288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142628288
Spliceosome [BR:
csaa03041
]
Complex B
Other components
RES complex
142628288
Complex C
142628288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
M
Motif
Other DBs
NCBI-GeneID:
142628288
NCBI-ProteinID:
XP_075658497
LinkDB
All DBs
Position
3:complement(5417816..5426555)
Genome browser
AA seq
506 aa
AA seq
DB search
MAAAASSGSNSLKEYLKRYGINDEEDKKKKKKKKKVQSKPDATGLLVVDEDPVWQKTVNL
EEENSGDSADEEKPQVNEDIEVKRMRRLEQLRARRAYNAISEDGSGWVSLSPKCLNSNDP
NSDMSPPRKQRIRNDTPSPEPEQDSGRDNIDLSPPRPNLNNDMSPPRKRRVRNDSPSPEP
GVKLSTDLLNSDMSPPRRRQVLADNDRSNPDISPPRRGRRGSTYQDDFHAPLGSDLSPPR
KSRKDLGRSGSPDLSPPRRRSTETNASHASLLPDLSPPRKSRKEAAVEEQRKTGLISGKD
MREEIARTKKNDLLRFNEMDPSISGRGAEPTYRDKKGERISKEEFLKLRKKVKVEEKPKE
IKLEWGKGLAQKREAEARLQELESEKDKPFARTRDDPELDKMLRERIRDGDPMAHLVKKK
RPELVLPNLGDNEKMKESGFVVPQDIPDHSWLKRRLDAAPNRYGIRPGRHWDGVDRSTGF
EKGLFKRMNEKRATETEAYLWSVSDM
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctgcatcttcgggatccaactctcttaaagaatatctgaaaagatatgga
atcaatgatgaagaggataaaaagaaaaagaagaagaagaagaaggtccaaagtaagcca
gatgcaacgggtcttttagttgtggatgaagatccagtttggcagaaaacagtcaatctc
gaagaggaaaacagcggcgattcagctgatgaagagaagccacaagttaatgaagacatt
gaggttaagcggatgaggaggcttgaacagttgagagccagacgcgcatataatgccata
tcagaggatggaagtggttgggtttcgctctctcctaaatgcttgaattctaacgaccca
aattctgatatgtctccacctcgtaaacagaggattcgaaatgacacaccttcaccagaa
cctgaacaggattctggcagagataacattgatttgtctcctccacgaccgaacctgaac
aatgatatgtctccacctcggaaacggagggttcgaaatgatagcccttcaccagaacct
ggagtgaagctttcaactgatttgctgaattctgatatgtctccacctcgtcgacgtcaa
gtattggcagacaatgataggagtaaccctgacatttctcctccacgacggggtcgtcgt
ggttctacatatcaagatgacttccatgctcccctggggtcagacctttcacccccaagg
aaaagcaggaaggatcttgggagatctgggtcacctgacctttcccctccacgtagacgc
tcaactgaaaccaatgcttcacatgcatctttgcttcctgacctttctccaccaaggaaa
agccgaaaggaagctgccgtggaagaacagcgaaaaacaggtctgatttctggcaaagat
atgagggaagagattgctagaactaagaagaatgatttgttgaggtttaatgagatggat
ccttctataagtggtcggggtgcggagcctacatatcgggataagaaaggagaacgtata
tcgaaggaggaattcttaaaactgcgaaagaaagtaaaagtagaagagaagcccaaggag
attaagttggagtggggcaagggcttggctcaaaagcgggaagctgaagctaggctgcag
gaattggaatctgagaaggacaaaccatttgcgcggaccagagatgatcctgaactcgac
aaaatgctgagggagagaataagagatggtgatcccatggcacatttggtgaagaaaaag
cgtcctgaactagttctcccaaacctaggggataatgagaaaatgaaggaatcagggttt
gttgttcctcaggacattcctgatcacagctggttaaaacgaagattagatgctgctcca
aatagatatggtataagaccaggaagacattgggatggagttgaccgtagtactggattt
gagaagggattgttcaaaaggatgaatgagaaacgagctacagaaacagaagcatatctt
tggtctgtctccgatatgtga
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