Castanea sativa (European chestnut): 142628319
Help
Entry
142628319 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142628319
KO
K24935
tetratricopeptide repeat protein 27
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csaa04990
]
142628319
Domain-containing proteins not elsewhere classified [BR:
csaa04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
142628319
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
CFAP70_TPR_C
TPR_17
TPR_CcmH_CycH
TPR_14
TPR_16
TPR_8
TPR_19
TPR_11
TPR_15
PRP6_TPR
CFAP70_mid_TPR
Ig_TRAPPC9-Trs120_3rd
CABIN1_N
TTC22_N
Motif
Other DBs
NCBI-GeneID:
142628319
NCBI-ProteinID:
XP_075658532
LinkDB
All DBs
Position
3:59055163..59076077
Genome browser
AA seq
935 aa
AA seq
DB search
MSQQPETERAVLLRGYELRLLRCTLTSSPASDSPPPPPPQPQPSDHHHHHQTHSSLLNDL
LSSIESGDYLRALSSDAAAALVLQHIADDESADRVYSELLRRVESFLVSEPEDDDDDEDK
AYRALIVVSIAVAAFLAFTQCNVTGPLKEMAKCPLALKKVGGGKGEDEEWENWARNQLMA
AGSDLLGKFSNLQYLVFAKMLLTRTRDLLFGESVSSTYGISSISWWLARFIFLQQRILDE
RSSSLFDLLHVYVGETLHHFDTLEKVTRYFGSSLRNEDALAIISMVHLEAGIMEYTYGRV
DSCRQHFESAEVAAGLQLSVTGILGFRTVHQAQPKAQSVLVTNTSSSNNVSNCPLESSGI
QVHKSSVGEDNLHLHQPETSDILMTPKLLVDNDEGSRLQGIQNGGPATAPLRGIQQAVIL
ARCLLIEKSTPHGEMQGWDMAPFIEAIDSQQLSYFIIRCFCDILRIRWESTRSRTKERAL
LMMDKLVQSVSEPSPGVAQRIPFCFGVYIPTIPALRKEYGELLVRCHLIGEAVKIFEDLE
LWDNLIFCYRLLEKKAAAVELIKKRLSEMPNDPRLWCSLGDVTNDDACYQKALEVSNDKS
ARAKRSLARSAYNRGDYQTSKILWESAMALNSLYPDGWFALGAAALKARDVQKALDGFTR
AVQLDPDNGEAWNNIACLHMINKRSKESFIAFKEALKFKRDSWQLWENYCHVALDVGNID
QALEAIQKVSDMTSNKRIDIELLKRIMIEVERRASTDHSGSPVMTNDDNFTDQDCPADSQ
IDRLNLNESTNAESVERRSRETEHLEILGKVLQRMVRNDGRADIWGLYARWHKIKGDLTM
CSEALLKQVRSYQGSDLWKDRDRFKSFAQASLDLCKVYMEISSSTGSRRELLAAEMHLKN
IIKQAESFSDTEEFKGLQACLDEVKMKLQSSPVPT
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaacccgaaacggaacgagcggtgctcctccgcgggtacgagctccgtctc
ctacgctgcaccctcacttcatctccggcgtccgactctccgccgccgcctcctcctcaa
ccgcagccgtccgatcatcatcatcatcatcaaactcactcttcactcctcaacgacctc
ctctcttcaatcgagtccggcgactatctccgcgccctatcctccgacgccgccgccgca
ctcgtcctccaacatatcgccgatgacgagtccgccgaccgagtctactccgagttgctc
cgccgagtcgagtccttcctcgtttcagaaccggaagacgacgacgacgacgaggacaag
gcttatagagcgttgatcgtggtcagtatcgccgtcgccgcgttcctcgccttcactcag
tgcaacgtgaccgggcctttgaaggaaatggcaaaatgtccattggcattgaagaaagtg
ggtggtggtaaaggagaagatgaggaatgggaaaactgggctcgtaatcagctaatggct
gctggctctgacttgcttggaaagttctctaatcttcagtatttagtttttgctaagatg
ttgctcacgaggacaagagacttgttatttggagaaagtgtgtcttcaacgtatggaatt
agtagcatctcgtggtggcttgctagattcatatttcttcaacagagaattttggatgag
cggtcgtcttccttgtttgatttattgcatgtctatgtgggcgagactctacatcacttt
gacactttagaaaaagtaacgcgctattttggttcaagtttacgcaatgaagatgcttta
gcaatcatctcgatggttcatttagaagctggaataatggaatacacctatggaagagtt
gattcttgcaggcaacattttgagtcagctgaagtggcagctgggcttcagctttctgtt
actgggattcttggcttccgtactgtacatcaggcacaacctaaggcacagagtgtactt
gttaccaacacaagctcatccaacaatgtcagtaattgccccttagaaagctctggtatc
caggtccacaagtctagtgttggagaagataatttgcatctacatcaacctgaaacctct
gacatattgatgaccccaaaattgttagtggataatgatgaaggaagtagattgcaaggc
attcaaaatggtggtcctgctacagcccctttgagggggatccaacaggcagtgattctg
gcccgatgccttcttattgaaaagagcactccacatggtgaaatgcaaggatgggatatg
gctccatttatagaggcaattgattctcagcagttgtcatacttcattatacggtgtttc
tgtgacatcttacgtattcgatgggaatcgactcgcagtcgcacaaaggagcgtgcatta
ctgatgatggataaactggtccagagcgtcagcgagccttctccaggagtggcacaacga
attcctttttgttttggggtttatatccccactattcctgccttgcgaaaggaatatggt
gaacttttagtgcgctgtcatttaattggtgaggcagttaaaattttcgaggatttagag
ttatgggataatcttatattttgctaccgcttattggagaagaaagcagcagctgttgaa
ctcatcaagaaacgactatctgaaatgcctaatgaccccaggttatggtgttcgttgggt
gatgttacaaatgacgatgcttgctaccaaaaagccctggaagtttcaaatgataagtca
gctagagctaagcgatcccttgctcgtagtgcatacaatagaggggactatcagacgtct
aaaatcctttgggaatctgcgatggccttgaattctttgtatccagatggttggtttgcc
cttggggctgctgctttgaaggctagagatgttcagaaggctctggatggatttactcgt
gctgttcaacttgatcctgataacggggaggcttggaacaatattgcttgtttgcatatg
atcaacaagaggagcaaagagtctttcattgcgtttaaagaagctcttaagttcaagcga
gatagctggcagttgtgggagaattactgtcatgttgctttggatgtgggcaatattgat
caggctctggaagctatacagaaggtttcagacatgactagtaataaaagaattgacatt
gaattattaaagaggattatgatagaggtggaaagaagggcttcaactgatcattctgga
tctcctgtgatgaccaatgacgataattttactgatcaagattgtccagctgattctcaa
atagaccgtcttaatcttaatgagtcaacaaatgcagagtctgtggagagaaggtcaagg
gaaactgagcatttggagattcttgggaaagttttacagcggatggttcgaaatgatggt
agagcagacatctggggcttatatgcaaggtggcacaaaatcaaaggagatttgacgatg
tgctctgaagccctcttaaagcaagttagatcatatcagggatctgatttatggaaagat
agagatcgttttaaaagttttgcacaagcctccttggacctttgcaaggtgtacatggaa
atttcttcatctactggtagccgtcgggaactccttgcagctgagatgcatctaaagaac
ataattaaacaggcggagagcttctcagacacagaagaatttaaaggtcttcaggcttgc
cttgatgaagtgaagatgaagctccaatccagtcctgtgcctacctaa
DBGET
integrated database retrieval system
