Castanea sativa (European chestnut): 142628628
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Entry
142628628 CDS
T11266
Name
(RefSeq) putative polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142628628
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142628628
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
142628628
NCBI-ProteinID:
XP_075658798
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Position
3:18698517..18708073
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AA seq
455 aa
AA seq
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MTVTLQLGGSGYARYIYFQHIQLEQTSNPIIIDQFYCDGGQGCTGKELLSIVLVLSVFST
GLGHGLVNEASEGFNETCEGAVGDVTCYGAIGDGETDDSEAFLKAWKALCEVEAASDIPM
LIVPMEKKFLLKPVAFEGPCNSDSVQVQVLGTILAPNTTEGWTNCYANTWLGFWNVSNLI
VNGTGEINGSGSIWWNNFSVQALRFYNCSNLQHSGLTHLDSPRNHISIIFCDNATLSYLN
ISAPESSPNTDGVDISSSTNVSIHDSYIGTGDDCIAVNDKTTSINITRIVCGPGHGISVG
SLGANGPYATVEEVYVNNCSFNGTLNGARIKTWQGGSGYARNIFFEQITLVDVKNPIIID
QFYCNGKHDCDSETSSVQVSNVTYIGIEGTCVGLDAITFNCDEIMCTNITMKHINITSSD
PEKSVVASCENAEGNSECTIPEVPCLTVDECDNRE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgacattgcaactggggggttcgggttatgcaaggtatatctactttcagcat
atccaacttgagcaaacctccaaccccatcattattgaccagttttactgcgatggtggc
caaggctgcacaggaaaggaactacttagcattgttttggtactttcagttttttcaact
ggactaggccatggccttgtgaatgaagcatcagagggttttaacgagacttgtgaaggt
gcagttggagatgtgacttgttatggtgctataggagatggagaaactgatgactccgaa
gcctttttaaaagcttggaaagctttatgtgaagttgaagcagcttctgacattccaatg
cttatagtaccaatggagaagaaattcctattaaagccagtggctttcgaaggtccatgc
aattccgacagtgtccaagttcaggttttggggacaattttagcacccaataccacagaa
ggatggacaaactgttatgcaaatacctggttaggcttctggaatgtgagtaatctcatt
gtcaacggtacaggagagatcaacggcagtggttcaatttggtggaacaatttcagtgtt
caagcactacgtttttataattgcagtaatcttcagcacagtggacttactcatcttgat
agtccaagaaaccatattagtataattttttgtgataatgcaactctctcttatctaaac
atatctgctcccgaatctagtcctaacactgatggagttgatatttcttcttcaaccaat
gttagcatccacgatagttatattggaactggagatgattgtattgccgtcaatgataaa
acgactagtatcaacatcactcgaattgtttgtggacctggtcatggtataagcgtggga
agcctgggagcaaatggaccatatgccacagtagaagaggtatatgtgaacaattgtagc
tttaatggaactttgaatggagcaaggatcaagacatggcaggggggttcgggttatgca
agaaatattttctttgagcaaatcacactcgtggatgtcaaaaacccaataattatagat
cagttttactgcaatggtaaacacgattgcgacagtgagacatcgtcagtacaagtgagc
aatgtgacatatataggtattgaaggaacttgtgttggtttggatgcgattactttcaac
tgtgatgaaataatgtgcactaacattacaatgaagcacatcaacataacatcatctgac
cctgaaaaatcagtcgtcgccagttgcgaaaacgccgagggaaatagcgaatgcaccata
ccggaagtgccctgcttaaccgttgatgaatgtgataatcgagagtaa
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