Castanea sativa (European chestnut): 142628669
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Entry
142628669 CDS
T11266
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142628669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142628669
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142628669
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142628669
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142628669
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142628669
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142628669
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142628669
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142628669
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142628669
Exosomal proteins of other body fluids (saliva and urine)
142628669
Exosomal proteins of breast cancer cells
142628669
Exosomal proteins of colorectal cancer cells
142628669
Exosomal proteins of bladder cancer cells
142628669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Thiamine_BP
Motif
Other DBs
NCBI-GeneID:
142628669
NCBI-ProteinID:
XP_075658832
LinkDB
All DBs
Position
3:complement(21179640..21189482)
Genome browser
AA seq
426 aa
AA seq
DB search
MAKASQIWSGESSFVKNVFYQYESGSPNLQFPCVFLPVWQLAVLEAAGRDVILSESRSLK
VINDGVTIAPSIELSDAIENAGGAILIQDFATKVNDLAGDGTTTAIVLVQAMIKSGMLAV
AFGANQVSLKKGMDKTVEELVKVLKKKSVPVRVKAVDTISSGNNEFVGNLIAEALEKIGP
DGVISIESSSSLRTFLIIELGLKLIDKGYMPPQFTTNHDKSIVEFDNAKVLVTDQKISTV
KEIVPLLEKTTQLSVPLLIIAEDMSRQVLETLAVIKMQGLINVAVVKCPGFLEGKKALLQ
DIALMTVQNSDLICGHFTALIIETIANVELQVLLAPAKSIASNAGVDGEIVVEKTRTCNW
QTGYNGMTGRYEDLLSAGVADPCQVSRCALQNAVSIAGVVLITQAVLVEKIKKPKPAMPH
VPGKTP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcatctcagatatggtcgggagaatcctcttttgtaaagaacgtcttttat
cagtatgaatcgggcagccctaaccttcaatttccttgcgtcttccttcctgtctggcag
cttgccgtccttgaggcagcaggccgtgacgttattctttctgagtctagatcgcttaaa
gtaattaatgatggtgttacaattgctccatccatagagctttcagatgcaattgagaat
gcaggaggagcaattctaatccaagactttgcaactaaagtgaatgatttggctggtgat
ggtacaactactgcaattgttttggttcaagcaatgatcaaatctgggatgctggcagtt
gctttcggggctaaccaggtttctttgaagaagggaatggataagactgtggaagaattg
gtcaaggtcttgaagaagaaaagtgtgccagtaagagtaaaagctgttgatacgatttca
tctggaaataatgaatttgttgggaacttaattgctgaagctttagaaaagattggccct
gatggagtcatctctattgagtcatcttcatcattgaggacatttttaataatagaatta
ggattgaagctaattgacaagggttacatgccaccccaattcactacaaaccatgacaaa
tctatagtggagtttgacaatgccaaagtcctagtaactgatcagaagatttcaactgtc
aaagaaattgttcctttactagaaaagactactcaactgagcgtcccactgctaatcatt
gcagaggatatgtccaggcaagtactggaaacactagcggtgatcaaaatgcaaggttta
ataaatgttgctgttgtcaaatgtccaggatttttagaaggaaagaaggctcttttgcaa
gatattgcacttatgacagttcagaattcagaccttatttgtggacattttactgccctg
atcatagaaactattgctaatgttgaattgcaggttctccttgcacctgcaaaatcaatt
gcttctaatgcaggtgtcgatggagaaattgttgtagagaagactagaacttgtaattgg
caaactggatacaatggaatgacaggcagatatgaagatcttctcagtgctggagttgca
gatccttgtcaggtttcaaggtgtgcacttcaaaatgcggtgtcaattgctggtgtagtt
cttatcactcaagctgtgttggtggaaaagataaagaaacctaagccagctatgccacat
gttccaggcaaaactccttaa
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