Castanea sativa (European chestnut): 142629278
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Entry
142629278 CDS
T11266
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142629278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142629278
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
142629278
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
PRIMA1
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
142629278
NCBI-ProteinID:
XP_075659344
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All DBs
Position
3:18670111..18681234
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AA seq
392 aa
AA seq
DB search
MLFQVGGQGSRPTFFEMSAAQQLPASLRAALTYSFGVLALRRPMFHRVLDYEDEFFAFLM
LILETHSLRTTDASFSESLYGLRRRAVKIKVKKDDARLMSGDGINHSGLEKRQKVLSVVF
LVVLPYFKSKLHSIYNKEREARLQASLWGHDDERFDDTEYIGGEDSLASSGNLEAEASIR
TRLTTRIQKIVGTCYPWIHASSEGVSFAYQLLYLLDATGFYSLGLHALGIQVCRATGQEL
MDTSSRISKIRSRERERLRGPPWLKVVQGALLSCMYTALDYAQTGLIAAVFFFKMMEWWY
QSAEERMSAPTVYPPPPPPPPPKVAEEGIPLPPDRTICPLCSQKRANPSVVTVSGFVFCY
ACIFKYVSQYKRCPITLMPATGDHIRRLFHDV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggagggcaagggagccggccgaccttcttcgagatgtcggcggct
cagcagctccccgccagcctccgcgccgctctcacctattctttcggcgtattggcttta
agaagaccgatgttccacagggttttagactatgaagatgaattctttgctttcctcatg
ctcattctcgaaactcacagcttacgtaccacagatgcatctttttctgaatctctatat
ggcttacggaggagagctgtgaagataaaagtgaagaaagatgatgctcgattgatgtca
ggtgatgggattaatcactctgggttagagaagcgccaaaaagttctttcagttgtgttt
ctggttgtgctgccatattttaagtcaaagttgcattcaatatacaataaagaaagggaa
gccaggcttcaagcaagtttatggggacatgatgatgaaagatttgatgatactgagtat
ataggaggggaggattctcttgcttcaagcggaaatttggaagcagaagcatcaattagg
acacgcttgacaacgaggattcagaaaattgtaggcacttgctatccatggatacatgct
agtagtgaaggagtatcttttgcttatcagctgttatatttgttggatgctactggattc
tattcgttaggactacatgcacttgggattcaagtttgccgagctacagggcaagagctg
atggatacttcttctagaatttcaaagataagaagccgtgaacgtgaaagacttcgtggg
ccaccatggctgaaggtggtacagggtgcactgctcagctgtatgtatactgcacttgat
tatgcacaaacaggattaattgcagcagtgttcttctttaaaatgatggaatggtggtac
caatctgctgaggagagaatgtcagctccaactgtgtaccccccaccacctcctcctcct
ccaccaaaggttgctgaagagggtattccactgccacctgacagaacaatttgtcctttg
tgctcacagaagcgtgcgaatccatctgtagttacagtttcagggtttgtcttctgttac
gcatgcatatttaagtatgtttctcagtataaacggtgcccaatcacattaatgcctgca
accggtgaccatataaggaggctctttcatgatgtatag
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