Castanea sativa (European chestnut): 142629375
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Entry
142629375 CDS
T11266
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142629375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142629375
03036 Chromosome and associated proteins [BR:
csaa03036
]
142629375
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
142629375
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
142629375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
142629375
NCBI-ProteinID:
XP_075659469
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All DBs
Position
3:complement(13035354..13049312)
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AA seq
1206 aa
AA seq
DB search
MEDSATNVARAIVVSLDWASTPDARSAAFSYLESIKTGDVRVLASTSLHLVRKDWSLVIR
MHAFKMLQHLVRLRWEELSPTERRDFANVAVDLMSEIANACEEWALKSQTAALVAEVVRR
EGLVLWQELREPLFSLSSKGPAQAKLVSMMLRWLLEDITVHNEDLEGDRRRLLLRGLTQS
LPKILPLLYTLLDRHYGAAWSEAANQQLDIAKQHVAAVTATLNAVNAYAEWAPLPDLAKY
GIIHGCGCLLTSPEFRLHACEFFKLVSPRKRPIDVSASEFDSAMSNIFQILMKVSGDFLD
KSSSNAGSIDESEFEFAEYICESMVSLGSSNLQCIASDSTLLPLYLQQMLGFFQHIKLGL
HYHSLLFWLALMRDLMSKPKVVAHSIGDSSAVNSLSTGSAQVDNEKRKILSFVNDDICSA
ILDISFQRMLKREKVPPGTAFPLGALELWSDDIEGRGDFGQYRSRLLELVRFVASYKPLI
AGAKVSERTIAIIKHLLLSQMPAQDLPVMESMQLALENIVISIFDGSNEFGGGSSEVQLA
LCRIFEGLLQQLLSLKWTEPALVEVLGHYLDALGPFLKHFPAAVGSVINKLFELLNSLPF
VVKDPSTSSARYARLQICTSFIRIAKAADKSILPHMKDIADTVAHMQREGCLLRGEHNIL
GEAFLVMASTAGIQQQQEVLAWLLNPLSQQWTQLEWQNNYLSEPLGLVRLCSETTTMWSI
FHTVTFFEKALKRSGLRKTYSNLQNNLTSSSNPLHPMASHLSWMLPPLLKLLRAVHSLWS
PSISQMLPGEIKVAMSMTDAEQFSLLGEGNPKLSKGALIFSDGSHADMGKEGYAEPNGSD
DIRNWLKGIRDSGYNVLGLSTTIGDSFFRGSDLHSVELALVENIQSMEFRHIRQLVHSVL
ILLVKFCPSDLWDVWLEKILYPLFNHSQQALNFSWSSLLHEGRAKVPDVHGILAGSDLKV
EVMEEKLLRDLTREICSLLSAIASPPLNTGLPSLEQSGHASRVDTSSLKDLDAFRLSSMV
GFLWTHKGLALPALKICLEAFTWNDGEAVTKVSSFSAALVVLAISTNNEELQAFVSRDLF
SAIIRGLALESNAIISADLVGLCREIFVYLCDRDPAPREVLLSLPYIKPHDLAAFEEALT
KTSSPKEQKQHMKSLLLLATGNKLKALAAQKSVNVITNVSTRPRNLVNAPESRSDDGEVV
GLAAIL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtgccaccaatgtggcccgtgccattgttgtgtccctcgactgggcctct
acccctgatgctcgcagcgccgctttttcttacttagaatctattaaaacaggagatgta
cgggttttggcaagcacgtcactccatctagtcagaaaggactggtctttagtaattcgg
atgcatgcgtttaaaatgttgcagcatctggtccgactgcggtgggaggaattaagccct
acagaacgaagggactttgcaaatgtcgctgttgatttgatgtctgagattgcaaatgct
tgtgaggagtgggctttgaaaagtcaaacagctgctcttgttgctgaggtagttagaaga
gaaggcttagttttatggcaagaactgcgggagcctctattttctctgtccagcaagggt
cctgcacaagctaagttggtttcgatgatgctgaggtggcttcttgaagatattacagtt
cacaatgaagatttggaaggtgataggcgtaggctcttattgcgaggacttactcaatct
ttgcctaagattttgcctttattatacactttactagataggcactatggagctgcatgg
agtgaagcagctaatcaacaacttgacattgcaaaacagcatgtagccgcagtgacagct
actttaaatgctgttaatgcatatgccgaatgggctcccttgcctgatcttgctaaatat
ggcataattcatgggtgtggttgcttacttacttctcctgaatttcgtcttcatgcttgt
gagtttttcaaactagtatcgccaaggaagagacctattgatgtctctgcctctgaattt
gattcggcaatgagtaatatctttcagatcttgatgaaagtctctggagattttttggac
aaatcaagctctaatgctggatctattgatgaaagtgaatttgagtttgcggaatatata
tgtgagagtatggtgtctttgggttcttcaaacttgcagtgtatagctagtgatagcacc
cttcttcctctttatttacaacagatgctggggttttttcaacacattaagctaggtctt
cattatcactccctgctcttttggctggcactaatgagagacttaatgtcaaagccgaag
gttgttgcacattcaattggagacagttcagctgtgaatagtctgagcactggttctgcg
caggttgataatgaaaagagaaagatcttaagttttgtgaatgatgatatatgtagtgca
attctggatatatctttccagcgcatgctgaagagagaaaaggttcctcctggaacagca
tttcctctgggggcgttggagttgtggagtgatgatattgagggcaggggtgatttcggc
caatatcgttcaaggctgttggaattggtcaggtttgttgcttcttacaagcccctcata
gctggtgccaaagtttctgaaagaactattgcaattatcaaacacctcttgctttctcaa
atgcctgctcaggacttacctgtgatggaaagtatgcaattggctctagaaaatattgtg
atatccatttttgatggatcaaatgaatttggaggcggtagttctgaagttcagcttgca
ctctgtagaatatttgaaggtttactccagcaacttctttctttgaaatggaccgagcca
gcacttgtggaagtacttgggcactatttagatgcattgggtccctttctgaagcatttt
cctgctgcagttggtagtgtcatcaataagctatttgagctcctaaactcacttcctttt
gttgttaaggatccttctacaagtagtgcacggtatgcgaggttgcagatatgtacatca
tttattcgaatagccaaagctgctgacaaaagtattctgcctcacatgaaggatatagca
gacaccgtggcgcatatgcaaagagaaggttgtttgctccgtggtgaacataatattctt
ggggaagcatttcttgtaatggcttctactgctgggattcagcagcagcaagaagttttg
gcatggttactaaatccgttgagccaacagtggacacaacttgagtggcaaaataattat
ttgtctgaaccactaggtctggttcgcctgtgctctgagacaacaactatgtggtcaatt
ttccacacagtgacattctttgagaaggcacttaagaggagtggactgagaaaaacgtat
tcaaatttacaaaacaacttgacatctagctctaatcctttacacccaatggcttctcat
ctgtcatggatgctgcctcctcttttaaaacttcttcgtgctgtacattccctttggtct
ccatccatatctcaaatgttgcctggagagattaaagttgcaatgagcatgactgatgct
gagcaattcagtctccttggggaagggaatcctaaattgtcaaagggtgcattaattttc
tcagatggatctcatgctgacatgggtaaggaaggatatgcagagccaaatgggtctgat
gatatacgaaattggttgaaaggtatcagagacagtgggtacaatgtattgggcttgtca
acaaccattggagattcatttttcagaggttcggatctacattctgttgagctagcccta
gtggagaatatacagtcaatggagttcaggcatataaggcagcttgttcattcagttttg
attcttttggttaaattttgcccttctgacttgtgggatgtctggctggaaaagatcctg
tacccattatttaaccactctcagcaggctttaaacttctcatggtccagtcttctacat
gaaggtagagcaaaggttccagatgtccatggcatacttgctgggtcagacttaaaagtg
gaagtaatggaagaaaagctacttcgagatctaactcgtgaaatatgttcactcctctcc
gccatagcttcgccacctctaaatactggccttccttctctagaacagtccgggcatgca
agccgtgtcgatacatcttctcttaaagatttagatgctttcaggttgagctctatggtt
ggtttcctttggacacacaaaggtctagcccttccagccttaaagatatgtctagaagct
ttcacatggaatgatggtgaagctgtgacaaaagtttcttcattttctgctgctttggtt
gtcctagccatatcaaccaataatgaggaacttcaagcatttgtttctagagatctgttt
tctgcaattatccgagggttggcccttgagtctaatgctattatcagtgcagatctggtt
ggtctctgtcgtgaaatattcgtttatctctgtgatagagacccagctcctagggaggtg
ttgctctcactcccttatatcaaaccccatgatttggctgcttttgaagaagctttaaca
aagacatctagtcctaaggaacagaagcagcatatgaagagcctgcttttattagctact
ggaaacaagttgaaagcacttgctgctcagaaaagtgtaaatgttattacaaatgtttca
acaaggccgcgcaatttggtaaatgctccagaatccagatctgatgatggggaagttgtg
ggattggcagcaatcttgtga
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integrated database retrieval system
