Castanea sativa (European chestnut): 142629456
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Entry
142629456 CDS
T11266
Name
(RefSeq) transcription factor MYB106-like
KO
K09422
transcription factor MYB, plant
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142629456
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
142629456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
142629456
NCBI-ProteinID:
XP_075659564
LinkDB
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Position
3:54988920..54990630
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AA seq
325 aa
AA seq
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MGRSPCCEKVGLKKGPWTPEEDQKLLAYIEEHGHRSWRALPAKAGLQRCGKSCRLRWTNY
LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNIHLKKRLTKMG
IDPVTHKPKTDALSSGSGNSKNAANVSHMAQWECARLEAEARLVRESKLVVVSNPVQSQT
QTQIQTQLINKNPPPPCLDVLKAWQGLWSKSESPGMFPRGCGDLVSPTSTLSFADHTVTI
PNVVFNESTVSAALDFAKNSVTCEMDNTMSLQDMNNSSTTTTTTTTNTTASAWLIGDSFR
AVSENNMQLSNTMEGFTDIFGYSCE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggtctccatgttgtgaaaaggtggggttaaagaaaggtccatggactcctgag
gaagaccaaaagctcttggcttacattgaagaacatggtcatagaagctggcgagccttg
cctgcaaaagccgggcttcagagatgtgggaaaagctgccgattgaggtggactaattac
ctcagaccagacattaaaagaggaaagttcagtttgcaggaagagcaaaccatcattcag
cttcatgctcttcttggaaacagatggtcagctatagcaactcacttgcccaagagaacc
gataatgagatcaagaactattggaacatacatttgaagaaaaggctaactaagatgggc
attgatcccgtgacccacaagcccaaaaccgatgcactcagctcaggcagtggcaactca
aaaaatgcagccaatgtaagccacatggctcagtgggagtgtgcacgtcttgaagcggaa
gctagacttgtgagagagtccaagcttgttgtggtgtctaaccctgttcagtctcagact
cagactcagattcagactcagcttatcaacaaaaacccaccaccaccatgcctagacgta
ctcaaagcttggcaaggattgtggtcaaagtcagaaagtccaggaatgttccctagaggt
tgtggtgaccttgtatctccaacttccacgttgagcttcgcagaccacactgtcactatc
ccaaacgttgtgttcaatgaaagcacagtgagtgcagcacttgatttcgccaaaaactca
gtcacatgtgaaatggataacacaatgtcattgcaggacatgaataatagtagtaccaca
acaacaactactactactaacaccacagcaagtgcatggttaattggcgactcttttagg
gctgtgagtgaaaacaacatgcaactctcaaataccatggaaggtttcacggatatcttt
ggttacagttgtgaataa
DBGET
integrated database retrieval system
