Castanea sativa (European chestnut): 142629560
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Entry
142629560 CDS
T11266
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142629560
Enzymes [BR:
csaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142629560
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142629560
NCBI-ProteinID:
XP_075659681
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Position
3:52289436..52291732
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AA seq
444 aa
AA seq
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MHTVAMTEVNKNCFLLFFFVSFVVIIPTLHANIAEYDDYWKQRAAQAEKDNHEAYNPDPE
EVTNSFNTHVNKALDGANSTRRQLGKYKGPCVATNPIDRCWRCDPEWYKHRKRLTKCVLG
FGHKTIGGKKGKYYVVTDSSDDDMVNPKPGTLRHAVIQKKPLWIVFARSMIIRLNQELIM
TGHKTIDGRGANVRIAYGAGITLQFVKNVIIHNIHIHNIVAGSGGTIRDSVDHVGFRTPS
DGDGISIFGSSKIWIDHVSMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDSFS
GDKIMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSSPTIISQGNRF
IAPPNVAAKEVTKRDYAAQGVWQNWIWRSQGDLMMNGAFFVQSGAPLKTHGFSKKQLIKS
KPGTYVRRLTRFSGTVSCRMGRPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtagcaatgacagaagttaacaaaaattgctttctgctcttcttttttgta
tcatttgttgtaatcatcccaacccttcatgccaacattgctgaatacgatgattactgg
aagcaaagagctgcccaagccgaaaaggacaaccacgaagcctataatcctgatcctgag
gaagtcacaaatagcttcaacactcatgtcaacaaagctttggatggcgccaacagcaca
agaagacaattgggaaagtataaaggcccatgcgtggccaccaatcctattgatcgatgc
tggaggtgcgaccccgaatggtacaaacaccgcaagaggctaactaaatgtgtccttggc
tttggccacaagactattggtggaaaaaagggaaagtactatgtggtcacagattcctca
gacgatgacatggtcaatcccaaacccgggactctcagacatgctgtgattcaaaagaag
cccctctggattgtgtttgcacgcagcatgatcattaggcttaatcaggagctaatcatg
actggacacaaaaccattgatggtaggggagctaatgttcgtattgcttatggtgctggc
attactctccaatttgtcaagaatgtgatcatccataacatccatatccataacattgtt
gctggaagtggtggaactataagggatagtgttgaccacgttggttttaggacccctagt
gatggtgatggtatctctatctttggctcatccaaaatctggatcgaccatgtttccatg
tctaattgccaagatggtctcattgatgccatcatgggttcaactgctattaccatctcc
aattgccatttcacccaccacaatgaggtgatgttgtttggtgcaagcgatagcttctct
ggcgacaagataatgcaaattacagttgccttcaaccattttggccggggattggtgcag
cggatgccaaggtgccgatggggattcgtccatgtggttaacaatgattacactcactgg
ctcatgtatgccattggtggtagcagcagtcctactattatcagtcagggtaatcgattc
atcgctcctccaaacgtggctgctaaagaggtgaccaagagggactatgcagcacagggt
gtctggcagaattggatatggagatcacagggtgatctgatgatgaatggtgcattcttc
gttcaatctggggctccacttaaaactcatggtttctcaaagaagcaattgatcaagagt
aaacctggcacatatgtgagaagactcactcgcttctcgggcacagtaagctgcagaatg
ggcagaccatgttaa
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