Castanea sativa (European chestnut): 142629646
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Entry
142629646 CDS
T11266
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial isoform X1
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142629646
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
142629646
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
142629646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
Toprim
DnaB_C
Toprim_2
AAA_25
Toprim_3
ATPase_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
142629646
NCBI-ProteinID:
XP_075659784
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Position
3:complement(45217510..45253293)
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AA seq
747 aa
AA seq
DB search
MRVCLRRPLHSTLLFSSSSTTRTSTTSPSRLGRVWSQRSLSHVSVSATTLRSFKLPTTPG
HTKSQSWMMGSKNMFKTNSFAIPFANSSHRHSFNTHTPLFSAFSSKPISKIHSLPLQTNG
FSSISHANVPGPDILESPTEYRLETTQLKILKRKLEELGMDTEICVPGQYNHLLCPMCKG
GDSEEKSLSLFVTEDGDAALWMCFRGKCGWRGSTRALADSRSLSGSLNPITKVKTQREIT
VENLQLEPLCDQIIGYFAERLISRETLQRNSVMQKSYAGDQLVIAFTYWKHGKLVSCKYR
DSNKKFWQEANTEKIFYGLDDIKDKSDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPAVVS
TKELPPEEKDIKYQYLWNCKEYLQKASRIVLATDGDTAGQALAEELARRLGRERCWRVKW
PKKNKVDHCKDANEVLMFLGADVLKEVIDNAELFPIRGLFNFKNYFEEIDAYYNRTYGYE
FGLPTGWRALNEFYNVVPGELTIVTGVPNSGKSEWIDALLCNLNETAGWKFALCSMENRV
REHARKLLEKHIKKPFFDASYGGSAERMTVEELQQGKKWLSDTFHLIRCEDDSLPSIKWV
LDLAKAAVLRHGVRGLVIDPYNELDHQRPASQTETEYVSQMLTKVKRFAQHHSCHVWFVA
HPRQLHHWVGGPPNMYDISGSAHFINKCDNGIVIHRNRDPAAGPVDQVQVCVRKVRNKVA
GTIGDAFLLYNRVTGEFMDIDEPSGKR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgtgtctgcgtcgtcctctccactctaccctcttattctcttcttcttctacc
actagaactagtactacctcacccagcagattgggccgtgtttggtcccaacgttctcta
tctcatgtcagtgtcagtgccaccacccttcgctctttcaagctccccactacaccaggg
cacaccaaaagccagagttggatgatgggctccaagaacatgttcaagaccaattctttt
gcaatcccatttgctaattcttcacatagacactcctttaacactcatacacccctcttc
tctgccttttcttcaaaacccatctctaaaattcattctttacccctccagactaatggc
ttctcttccatctctcatgccaatgttcccggaccagatattttggagagcccaacagaa
tataggcttgaaacaacacagttgaaaatcctgaagcggaaattggaggagcttggaatg
gacaccgaaatatgtgtaccgggacaatacaaccacttgctttgtccaatgtgcaaaggt
ggggattcagaggagaagagcctctctctttttgttacagaagatggggatgctgcttta
tggatgtgtttccgcggaaaatgtggctggagaggcagtacaagggccttagcagatagc
cggtcgctttctggatctttgaacccaataaccaaagttaagactcaaagagaaattaca
gtggagaacctgcaattagaaccactttgtgaccagataattggttattttgccgagcgg
ttaatatcaagggaaacactgcagagaaattctgtcatgcagaagagttatgctggtgat
cagcttgtaattgcatttacttattggaaacatggaaagcttgttagttgcaagtaccgg
gacagcaacaagaagttttggcaggaagcaaatactgaaaagattttttacgggctcgat
gatattaaggataaaagtgatattattattgttgaaggtgaaatggacaagcttgcaatg
gaagaagctgggttccgcaattgtgtgagtgtgccagatggtgcccctgcagtagtttcc
acaaaagagttgccacctgaagaaaaggacattaagtatcaatatctgtggaactgcaaa
gagtatttacagaaggcatcacgcattgtacttgccaccgatggggatacagccggtcaa
gctttagctgaagagcttgcacgccgccttggaagggaaagatgctggcgagtcaaatgg
ccaaagaaaaataaagtggaccattgcaaagatgcgaatgaggttcttatgtttcttggc
gctgatgtactgaaggaagtaattgacaacgcagaattattccccatacgtggattgttc
aactttaaaaactactttgaagaaattgatgcgtattataatcgtacttatggatatgag
tttggtctcccaactgggtggagggctttaaatgagttctataatgtggtgccaggagag
ttgactatagtaactggggttcccaattcaggcaagagtgagtggattgatgctctcttg
tgcaatcttaatgagactgctggttggaaatttgcactttgctctatggagaacagggtt
cgggagcatgcaaggaaacttttggagaaacacataaagaagcctttctttgatgcaagt
tatggtggatctgctgagcgtatgactgtggaggagttgcagcaagggaagaaatggttg
agtgatacatttcatctcataaggtgtgaggatgattcccttccaagtattaaatgggtt
cttgatcttgcaaaagcagcagttttgaggcatggggtgcgtggacttgtaattgatcct
tacaacgagcttgatcatcagcgtcctgcaagccagactgagacggagtatgtgagtcag
atgcttaccaaagtcaaacgttttgctcaacatcactcttgtcatgtttggtttgtggca
catcctagacagttgcaccattgggttggcggtcctcctaatatgtatgatataagtgga
agtgcgcactttataaacaaatgtgacaatgggattgttattcatcgtaatcgggatcca
gcagctgggccagtcgatcaagtacaagtttgtgttcggaaggttcggaataaggttgct
ggaaccataggcgatgccttcttgttgtacaatagggtaactggtgaattcatggatatt
gatgaaccatctggcaagagatag
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