Castanea sativa (European chestnut): 142629819
Help
Entry
142629819 CDS
T11266
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142629819
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142629819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
142629819
NCBI-ProteinID:
XP_075659968
LinkDB
All DBs
Position
3:27669728..27676817
Genome browser
AA seq
589 aa
AA seq
DB search
MAASSSSVPFFPNIREEDQNQMKQQHSSTAPTSSTAQAPPPPQKKKRNQPGTPNPDAEVI
ALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPT
CVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDC
GTLFSRRDSFITHRAFCDALAQESARQPPNMGSAIGSHIYGNSNMGLGLSQVGPQISSMQ
DQNNQSNDMLRLGSSRPGQFDHLLPPGIGSSFRPPHPMPSSAMFMQDSSQNYHQEHQSQQ
GLMSEKPFHGLMPFSDLQNSTTSNPPPAGTNLFNLGFMSNTSSNSSSNANNNNTSLPSSA
MLMPNHFNNENGSGGGSEGSNLFSNNMMADQITSGVPSLYTTSVQSNTAMPHMSATALLQ
KAAQMGSTSSNNNTSSSLLRSFGSSSSKSERQVVPGGLSSMFGENSENHFQDLMNSFTSG
NSSIFGSKFGTYDTNRTNLELMDQEPNNKPNQNLSGGGGGSGSDRLTRDFLGVGQIVRSM
SGVSQRDQQQQQHQQQQQQQQHRIDMSSLNSDRNTAPSSQSFGGGGNFQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcctcttcatcggtacctttctttccaaatattcgagaagaagatcaaaac
cagatgaagcaacagcattccagtactgcaccaacatcatctacagctcaagctccacca
ccacctcagaagaaaaagagaaatcaacctggaacaccaaatccagatgcggaggtgata
gcactatctcccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaa
gggttccaaagggagcaaaacctacagcttcacagaagaggacacaacctgccttggaag
ctaaagcagaagactacaaaagaaccaaaacgcaaggtttatctgtgccccgagcccaca
tgtgttcaccatgacccttcaagggctctgggagacctcactgggatcaaaaaacactac
tctcgtaagcacggtgagaagaaatggaagtgtgagaagtgttccaagagatatgctgtg
cagtctgattggaaagcccattccaaaacctgtggcactagagaatacagatgtgactgt
ggcactctcttctctaggcgtgatagtttcatcactcatagggccttttgtgatgcattg
gctcaggaaagtgcaagacaacctcccaacatgggcagtgcaattgggagtcacatatat
ggaaatagcaacatggggttgggattgtctcaagtgggtcctcaaatttcctcaatgcaa
gaccaaaacaaccaatccaacgatatgttacgactcggcagtagccgtcccggccaattc
gatcatctccttccacccgggattggttcctctttccgaccaccacatccgatgccttct
tcggctatgttcatgcaagattcaagccaaaactatcatcaagaacaccagtctcaacaa
gggttaatgtcagagaaaccatttcatggactaatgccattttctgatcttcaaaacagc
acaaccagtaaccctcctccagctggaaccaatctcttcaaccttggcttcatgtccaat
acaagttctaatagcagtagcaatgccaacaacaacaacaccagccttccatcttcagct
atgctaatgcctaatcatttcaacaatgaaaatggcagtggtggaggcagtgaagggtct
aatctcttttccaataacatgatggctgatcaaatcacttctggtgtcccttctctctat
actacctcagttcaaagcaacactgctatgcctcatatgtcagcaactgcactgcttcaa
aaggctgctcaaatgggttcaacttcaagcaataacaacactagttcctctctgctaaga
tcttttggaagctcttcctccaaatctgaaagacaagttgtaccaggaggcttaagcagc
atgtttggagagaatagtgagaaccacttccaagacctaatgaactcctttactagtgga
aactcctccatttttggaagcaagtttggtacatatgatacaaataggaccaacttagaa
ctcatggatcaggaacccaataataagccaaatcaaaatctgagtggcggtggtggagga
tctgggtctgataggttaacaagggactttcttggggtcggacaaatagtgagaagcatg
agcggagtttcacaaagagaccagcaacaacaacaacatcaacaacagcagcagcaacaa
caacatcgcattgatatgagctccttaaactcagacagaaatacggcgccgtcaagccaa
tcttttggaggtggagggaattttcagtga
DBGET
integrated database retrieval system
