Castanea sativa (European chestnut): 142629845
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Entry
142629845 CDS
T11266
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142629845
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142629845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
142629845
NCBI-ProteinID:
XP_075660001
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Position
3:complement(27713917..27718932)
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AA seq
580 aa
AA seq
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MASSSSSTLFFGTREENQSQTTQQPSSTITSSTTPTTAPQKKRRNQPGNPNPDAEVIALS
PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVH
HDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL
FSRRDSFITHRAFCDALAQESARHPTNLNTMGSHLFGSNHMSLGLSQLGSQIPPLQNQNP
PSSNMLRLGSAGGAKFEHLISPSNPSSYGQPPQSMHSSSLFIQDANQGFPNKPQLHGLMQ
LPDLQSNSNNSSPAASLFNLSFFPNNNSSPGGISSGDNVNMSSTNLSSSGLLMQDQLNNS
NGGSQGTTLFSTNMGDHVGSGVSSLYSNSLPPENITSHMSATALLQKAAQMGSTTSSNNS
SSMLRGLASSKSEKQNVLANFGVSFGNDNGGESLRSHIESGNHLQGLMNSLANASSSMFG
RGQDNNFGGFNGSGVTLDQHHSNTSFSTVDEAKLHQNLAVNFGGSDKLTLDFLGVGGMVR
NMGGGYSQREQQHAINMSSLDPELKTAQQASQAFGSTTMQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcttcctcatccacactgttttttggaaccagagaagagaatcaaagccag
acaacacaacaaccttcttctacaatcacttcctcaactactccaaccacagctcctcaa
aagaaaaggagaaaccaacctggaaatccaaatccagatgcggaggtaatagcactatct
cccaagaccttaatggcaacaaataggttcatatgtgaggtatgtaacaaagggttccaa
agggagcaaaacttacagcttcacagaagagggcacaacctgccatggaagctaaagcaa
aagactaacaaagaaccgaaacggaaggtgtatctgtgccccgagccgacatgcgttcac
catgacccttcacgagctctcggcgacctcactggcattaaaaagcactactctcgaaag
cacggggagaagaaatggaagtgtgagaagtgttcaaagaggtatgccgtgcagtcggac
tggaaggctcattccaagacctgtggcactagagaatacagatgtgactgtggcactctt
ttctctaggcgagacagttttatcactcacagggccttttgtgatgcactggctcaggag
agtgctaggcatcctaccaacttaaacacaatggggagtcatctttttggaagtaaccac
atgagcctaggcctatcacaacttggttctcagattcccccactgcaaaatcagaaccct
ccatctagtaatatgttacgactaggcagtgccggtggtgcaaagtttgagcaccttatt
tctccatcaaatccttcttcatatggccagcctccacaatcaatgcattcatcttcctta
ttcattcaagacgcaaaccaaggctttccaaacaagccacagttgcatggactcatgcaa
cttcctgatcttcaaagcaatagtaacaactcctcaccagctgctagtctctttaacctt
agcttctttcctaataataacagttccccgggtggtataagcagtggagacaatgtcaat
atgtctagcaccaatttatcgtcttcgggcttattaatgcaagaccagcttaacaatagc
aatggtggcagccaagggacaacgctattctctactaacatgggcgatcatgttggctcc
ggtgtctcttctctctacagcaattctttgcctcctgaaaacataacttcacatatgtct
gccactgcattgcttcaaaaagctgctcaaatgggatcaactacaagcagcaacaatagt
tcttctatgttaagaggcttggctagttctaaatccgagaagcaaaatgtgttggccaac
tttggtgttagttttggcaatgataatggaggagagagcctaagatcacatatagaaagt
ggaaaccatcttcaagggttaatgaattctcttgctaatgcaagctcttccatgtttggg
cgtggacaagataacaactttggtgggttcaatggcagtggggtcacgttggaccagcac
catagtaacacgagtttcagcactgtggatgaggccaagttgcatcaaaatctggcagtg
aactttggagggtctgacaagttgacactggattttttgggcgtgggaggaatggtaagg
aacatgggtggagggtattcacaaagagaacaacaacatgctatcaacatgagttctttg
gatcccgaattaaagacagcccagcaggcaagtcaagcatttggaagcacaacaatgcaa
tga
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