Castanea sativa (European chestnut): 142629868
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Entry
142629868 CDS
T11266
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
csaa Castanea sativa (European chestnut)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
T1R_D3-like
DUF3198
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
142629868
NCBI-ProteinID:
XP_075660030
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Position
1:complement(60923616..60932953)
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AA seq
821 aa
AA seq
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MACSLLPVPDISRPLVLKKLSSSPKLWTLLGLRCPCHFKTKPSLSLSLSLTKAVYTQNFS
LPLSRDKMEPDQDPISLLNERIRRDYNKRDASRTVMDSKEAEKYIQLVKEQQQRGLQKLK
GDRQPKKNGGFSYKVDPYSLRSGDYVVHKKVGVGRFVGIKFDVPKDSPNPVEYVFIEYAD
GMAKLPLTQASRLLYRYNLPNETKRPRTLSKLNDTTVWERRKTKGKVAIQKMVVDLMELY
LHRLKQRRPPYPKSPSMAEFEAQFPFEPTPDQKQAFIDVGKDLTERETPMDRLICGDVGF
GKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVISERFSMYPETKVGLMSRFQTKAE
KEEHLHMIKNGQLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDV
LTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSKENVISAIKYELDRGGQ
VFYVLPRIKGLEEVMEFLEQSFPTVEIAIAHGKQYSRQLEETMEKFAQGEIKILICTNIV
ESGLDIQNANTIIVQEVQQFGLAQLYQLRGRVGRAYKEAHAHLFYPDKSLLTDQALERLA
ALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRV
ISVPYQSVRVDININPHLPSEYINYLENPMEIINEAEKAAEKEIWSLMQFTENLRCQYGK
EPYSMELLLKKLYVRRMAADLGIKRIYASGKMVGMKTNMTKLVFKLITESMVSDVHRNSL
VLEDDLIKAELLLELPRDQLLNWIFQCLAELHASLPALIKY
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttctctgctcccagtacccgacatttccaggcctctggttttgaagaagctc
agctcatctccaaagctatggacactgttgggtctcaggtgtccttgccacttcaaaacc
aaaccttcactttcactttcactttcactcaccaaagctgtctacacccagaacttctct
ctccctctctccagagacaaaatggaacccgaccaagaccccatttcgttactaaacgag
aggattcgccgtgactataacaagcgagacgcttcgagaaccgtcatggactcgaaggag
gctgagaagtatattcagctagtgaaggagcagcaacagaggggcttgcaaaaactcaag
ggagatagacagcccaaaaagaatggtgggttcagttacaaagtggacccatatagtctt
cgctctggggactatgttgtgcataaaaaagtgggtgttggaagatttgtgggtattaaa
ttcgatgttcctaaagattctccaaacccagtcgagtatgtgttcatagaatatgcagat
ggaatggctaagcttcctctcacccaggcttctcgtttgctctatcgatataatctcccg
aatgaaacaaagaggccccggacattgagtaaattgaatgacacgactgtatgggagagg
agaaagactaaaggaaaggttgcgatacagaaaatggttgttgacttgatggagctgtat
ctacataggctaaaacaaagaaggcctccctacccaaagagtccttccatggctgaattt
gaagctcaatttccttttgaacccacaccagatcaaaaacaggctttcattgatgtgggg
aaggatttgacagaaagagaaactccgatggaccgattaatttgtggagatgttggcttt
ggtaaaactgaagttgcattacgtgccatattttgtgtagtctcagcaggtaagcaagct
atggttctagcacctacaattgtattagccaaacaacattttgaggttatttcagagcga
ttttctatgtatcctgaaacgaaggttggactcatgagcaggtttcagaccaaagcagag
aaagaggagcacttgcacatgattaaaaatggtcaactggacattattgttgggactcac
tcgcttcttggaaatcgtgttgtgtataataatctaggtcttctcgtggtagatgaggaa
cagaggtttggcgtcaagcagaaggagaagattgcttcattcaaaacttcagttgatgtt
cttacgctctcagcaacgcctataccaagaaccctttatttagcattgactgggtttcgt
gatgcaagtttgatttcaactccacctccagaaagagtaccaataaaaactcacctttca
gcatatagcaaggaaaatgtaatatcagccatcaagtatgagctggaccgcgggggccaa
gttttttatgttctacctcgtatcaaaggactggaagaagtgatggaatttctcgaacag
tcatttccaactgttgaaatagctattgcacatggaaagcaatactcaaggcagcttgag
gaaaccatggagaaatttgcacaaggtgaaattaaaattcttatatgcacaaatattgtg
gaaagtgggcttgacattcaaaatgcaaacaccatcatagttcaggaggttcaacaattt
ggcttagcgcagttgtatcagttgcgtggaagagtagggcgggcatataaggaagctcat
gcacatttattttacccagataagtcactactgactgatcaagcactggagaggcttgct
gctctagaagaatgccgtgaacttggccaaggctttcaacttgcagaaagagacatgggt
attagaggttttggcaccatctttggtgagcaacagacaggtgatgttggaaatgttggc
attgatctcttctttgagatgctctttgagagcttgtccaaggttgaagagcatcgtgtg
atttccgttccttaccagtctgtacgggttgatataaatataaaccctcatctcccttct
gagtacataaattatttggagaaccctatggaaataattaatgaagctgagaaagctgct
gagaaagaaatctggagtttgatgcaatttacagaaaatctgcgttgccaatatggaaaa
gagccttactccatggagcttctattgaagaagctttatgtgaggaggatggcagcagat
ctagggataaaaagaatctatgcttcaggaaagatggtcggtatgaaaacaaacatgact
aaactggtttttaagctgattacagagtcaatggtgtctgatgttcaccgaaattctttg
gttctagaggatgacctaattaaggcagaactacttttagagctaccaagagatcaactg
ctaaattggatttttcaatgcttggctgaacttcatgcttcgctgccagcactaataaaa
tattag
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