Castanea sativa (European chestnut): 142630257
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Entry
142630257 CDS
T11266
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142630257
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142630257
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
142630257
NCBI-ProteinID:
XP_075660350
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Position
4:complement(996245..1006104)
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AA seq
392 aa
AA seq
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MTKSIIYFNLILSCIFLAFFQSSNAAYNVVSFGARADGKTDSSLPFLRAWGSACNSVQSA
TIYVPRGTFLLKPIVFSGPCKSKIVFQIAGTLVAPSDYWSIGNSGNWILFNKVSWVSVNG
GIIDANGASYWSCRRAGRSCPTGSSSISFMWSSNIVVNGLKSINSQLIHVAIVHCNDVVL
RNLKITAPSTSLNTDGIHVQSSTGITISSSIIKTGDDCISIGQGSKNLWIDHIACGPGHG
ISFGSLGDNLYEDGVQNVTITSSVFTRTQNGVRIKSWARPSNGYARNIVFRNIVMRGVYN
PIIIDQKYCPDNKGCPNQNSGVKISQVTYKNIRGTSASQVAMNFICSSSNPCNGIKLQNI
RLTYNKRAATSSCTNAAGFSSGVVIPRSCLQK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcaattatatattttaacttgatattgtcttgtattttcttagccttcttt
caatcatcaaatgcagcatataacgtggtcagttttggagctagagcagatgggaaaact
gactcgtcgctaccatttcttagggcatggggttcagcatgcaactctgttcaatctgcc
actatttacgttcctagagggactttcttgttaaaaccaatagttttttcagggccatgt
aagagtaaaattgtgtttcagattgctggcactcttgttgccccatcagattattggagc
attggcaattctggaaattggattttgttcaacaaggtctcttgggtttcagtcaatggt
ggcattatcgatgcaaatggagctagctattggtcttgccggagagctggaaggagttgc
ccaactggatcaagttcaatatcgttcatgtggtcaagcaatatcgtggtgaatggcttg
aaatcaatcaacagccagttaattcatgttgctattgtccattgcaacgatgttgttctt
cgaaacttgaagattacagcccccagcacgagcctcaacaccgatggcatacatgtgcaa
tcctcaactgggatcaccattagttcaagtatcataaagacaggagatgattgcatatcc
attggtcagggctctaagaacttgtggattgatcatattgcctgtggccctggacatgga
ataagctttggtagcttgggcgataatctctatgaagatggtgtgcagaatgtaacaata
acaagttcagttttcacaagaactcaaaatggagtacgaataaaatcatgggccaggccc
agcaatggatatgcaagaaacattgttttcaggaacattgtcatgagaggtgtctataac
cctataatcattgatcaaaagtactgccctgataacaaaggctgtccaaatcagaattct
ggtgtgaagattagtcaagtcacctacaaaaacataagaggaacatcggcctcgcaagta
gccatgaattttatttgcagttctagtaatccatgcaatgggatcaaattgcaaaacata
aggcttacttacaataaaagagctgcaacatcttcctgcaccaatgccgctgggttcagt
agcggagttgtcattccaaggagttgtttgcaaaaatag
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