KEGG   Castanea sativa (European chestnut): 142630557
Entry
142630557         CDS       T11266                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03010  Ribosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    142630557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csaa03019]
    142630557
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142630557
Messenger RNA biogenesis [BR:csaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     142630557
Exosome [BR:csaa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   142630557
  Exosomal proteins of colorectal cancer cells
   142630557
  Exosomal proteins of bladder cancer cells
   142630557
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML Beta-prop_SPT8 DSE1_N Beta-prop_EIPR1 CFAP251_N WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR41 ASA1 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st TRM82_WD Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR75_2nd PAC11 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_ACSF4 WD_LRWD1 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR19_1st Tricorn_2nd DUF7899 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_pof12 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 142630557
NCBI-ProteinID: XP_075660674
LinkDB
Position
4:complement(27615752..27617861)
AA seq 328 aa
MAEGLVLRGTMRAHTDMVTAIATPIDNSDIIVTASRDKSIILWNLTKEDKTYGVPRRRLT
GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLQAGVSARRFVGHTKDVLSVAFSIDNRQI
VSASRDRTIKLWNTLGECKFTISDQEAHQDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL
TNCKIKNTLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDAGAIIHAL
CFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKADDTTSSNSTKKKVIYCTS
LNWSADGSTLFSGYTDGVIRVWGIGRYQ
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcagaaggactcgttctccgcggaaccatgagggcacacaccgacatggtgacagcc
atagcaacacccatcgacaacagcgacatcatcgtgactgcctcgcgcgacaaatccatc
atcctctggaacctcaccaaggaagacaagacctacggtgtccctcgccgtaggctaacg
ggccactcccacttcgtcgaagacgtggttctctcctccgacggccagttcgctctctcc
ggctcatgggacggcgagctccgcctctgggacctccaggccggcgtctccgcccgccgc
ttcgtcggccacaccaaagacgtcctctccgtggctttctccatcgacaaccgtcagatc
gtgtcggcctcccgtgaccgcacgatcaagctctggaacaccctcggagaatgcaagttc
actatctctgaccaagaggcgcaccaggactgggtctcgtgcgttcgtttcagccccaac
actctccaacccaccatcgtttcggcgtcgtgggataagactgtgaaggtttggaacttg
accaactgtaagattaagaacacattggctggacacaccgggtatgtgaacaccgtcgcg
gtttcgcccgatgggtcgctttgtgccagtggtgggaaagatggggtgatcctgttatgg
gatttggctgaggggaagaagctgtactcgcttgacgcgggtgccattattcatgctctc
tgcttcagtcctaataggtactggctttgcgccgccacggagcagagcattaagatctgg
gatttggagagtaagagcattgttgaggatttgaaggtggatctcaagactgaggctgag
aaggccgatgacaccacctcttccaatagtacaaagaagaaggttatctactgcacaagc
ttgaactggagtgcagatggaagcacactgttcagtgggtatacagatggtgttatcaga
gtgtggggcattggtcgctaccagtaa

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