Castanea sativa (European chestnut): 142630706
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Entry
142630706 CDS
T11266
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142630706
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
142630706
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
142630706
Prokaryotic type
142630706
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
142630706
NCBI-ProteinID:
XP_075660849
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Position
4:complement(38532109..38536814)
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AA seq
379 aa
AA seq
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MLFSKFLTSWRSQRRRFAQTTPFHHPTENPKSKLHEPRTPPRLCNSDQLLALWTKTVSKF
VEAMETGTKDSGRAEDKESSNKTKCVMNIQGYPVKGLSIAGHETCIIFPSLNIAFDIGRC
PHQAIQQDFLCISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPTCIKADVEQLFEVHRRM
DQSDLKHNLIGLDVGEEFYLRKDLKVRAFKTYHVIPSQGYVVYSVKQKLKQEYIGLPGNE
IKNLKLSGVEITYTVTVPEIAFTGDTMSDFIVDQHNIDALRSRILVMEIPGQREYLINTS
VCKYNTKCTFVDNSVQVEGARDYGHTHISEIIGHAERFENKAILLIHFSARHTAEEIQQA
VSALPAPLAGRVFALTEGF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctatttagcaaatttttgacgagctggcgcagtcaaaggcgccgttttgcccagaca
acaccgtttcaccacccaacagaaaatcctaaatctaaactccatgagcccagaactcct
cctcggctctgcaactcagaccagctcctcgccttgtggaccaagaccgtgagtaagttt
gttgaagccatggaaactggaaccaaagattctgggcgggccgaagacaaagagagctcg
aacaaaaccaagtgtgttatgaatatacaagggtacccggtaaagggtttgtcaattgca
ggccatgaaacctgcataattttcccttctctcaatatagcctttgatattggtcgctgt
ccccaccaagctatacagcaagactttctctgtatctcccatgcccacatggaccacatt
ggaggactccccatgtatgttgcaactcgtggcttatacagaatgaagcccccaacaatc
attgtaccaacatgtataaaagcagatgtagaacaactctttgaggtgcacagaagaatg
gaccaatcagatctgaagcataatctaattggcttggatgttggagaagagttttatttg
agaaaagaccttaaagtaagagcttttaagacataccatgtcataccaagccagggttat
gtagtttactctgtaaaacagaaacttaagcaggagtacattggccttcctgggaatgag
attaagaatttgaagttatcaggtgtggagattacatacacagtgacagtacctgaaatt
gctttcactggagataccatgtccgactttatagttgaccaacataacattgatgccttg
agatcaagaattctagttatggagataccaggtcaacgagagtatctcattaacacttct
gtgtgtaaatataatacaaaatgcacctttgttgataactctgttcaagtggagggtgca
agagattacggacacacacatatatctgagattataggtcatgcagagagatttgagaac
aaagcaattcttctaatccacttttcagctcgtcatacagctgaggaaattcaacaagct
gtatctgctttgcctgcacctttagcaggtcgagtttttgctctcacagaaggtttctga
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