Castanea sativa (European chestnut): 142630846
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Entry
142630846 CDS
T11266
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csaa03036
]
142630846
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
142630846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
AAA_18
AAA_14
nSTAND3
AAA_2
Viral_helicase1
NPHP3_N
Cytidylate_kin
ATPase_2
NACHT
ABC_tran
RNA_helicase
AAA_28
TIP49
AAA_24
AAA_30
AAA_11
AAA_5
TsaE
AAA_33
RuvB_N
DUF815
SLFN-g3_helicase
AAA_17
KAP_NTPase
Rad17
AAA_7
nSTAND1
bpMoxR
ResIII
KTI12
AAA_RNF213_4
PduV-EutP
NB-ARC
IstB_IS21
AAA_19
AAA_3
nSTAND6
Mg_chelatase
SRPRB
SPC25
Cytidylate_kin2
NTPase_1
CPT
Motif
Other DBs
NCBI-GeneID:
142630846
NCBI-ProteinID:
XP_075661016
LinkDB
All DBs
Position
4:44549578..44555190
Genome browser
AA seq
470 aa
AA seq
DB search
MSTPMEVTLQNPPDPDMSDQNAVASASASAPSPPPPPPPPPPLLPPVLADDRVSVSVEAC
LKPSSTARIDDVRSAIERMLEKRSLSYIDGPIPVPLDDPFLTENVERIRICDTDEWVQNH
EILLFWQVKPVVHVFQLSEEGPCEDVSGDGQLPSFNEWMLPAKEFDGMWESLIYESGLKQ
RLLRYAASALLFTEKGIDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYPQS
QLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSG
SEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITTAIDIAFVDRADIKAYVGPPTLQAR
YEILRSCLQELVKKGILSNFQDSDHLVVPNFASTKEKLNMPEMQETRTKFHLCKQLLEAA
EACEGMSGRSLRKLPFLTHAALSNPYNCDPSRFLCKMVDTARGELSELPD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtactccaatggaggtcacacttcaaaaccctccagatcccgatatgtccgaccaa
aacgccgtcgcatcagcctcagcctcagctccctctcctcctcctccgcctccgcctccg
cctccgcttcttcctcctgtactcgccgatgacagagtctccgtttcagttgaagcttgc
ttaaagccctccagcactgctcggattgacgatgtccgctcagccattgagagaatgctt
gaaaagaggagtttaagctatattgacgggcccattccggtgcctcttgatgatccgttt
ctcacagaaaatgtggaaagaatccgtatttgcgacacggatgagtgggtgcagaaccat
gaaattcttttgttctggcaagtcaagcctgttgtgcatgtctttcagcttagtgaggaa
ggaccatgtgaggacgtaagtggagatggccaacttcctagctttaatgaatggatgctt
cctgcaaaggaatttgatggcatgtgggaaagtttaatctatgaatctggtctcaagcaa
aggctgttgcggtacgcagcaagtgcattactctttactgaaaagggtattgatcctttc
cttgtgtcatggaaccgcattattcttctgcatggacctccaggaacagggaagacatct
ttatgtaaagcattagcccagaagttatccatccgattcaactccagatacccacagagc
caattggttgaggttaatgcacattctttgtttagtaaatggttctccgaaagtggcaag
ttggttgcaaagcttttccaaaaaattcaagaaatggtggaggaagaaaacaatctggta
tttgttttaattgatgaagttgaaagtcttgctgctgctagaaaagctgctttgtccggt
tctgaaccttcagactctattagggtcgtgaacgcgctactaactcagatggataaattg
aaatcatcgccaaatgtgataattctcacaacctccaatattaccactgctattgatatt
gcatttgttgatcgagctgatatcaaagcatatgttggtcctccaacactccaagctcgt
tatgaaattttaagatcctgtctgcaggagcttgtgaaaaagggaatcttatcaaatttt
caggattctgatcaccttgtagttccaaattttgccagtacaaaagaaaagttgaatatg
cctgagatgcaggagactcggacaaaatttcacctgtgtaaacaattgcttgaagctgca
gaagcatgtgagggaatgagtggacgatctttaagaaagcttccatttttgacgcatgca
gctctctccaatccttacaattgtgaccctagcaggttcttgtgtaaaatggtagataca
gcaaggggtgagctttctgagctgcctgactga
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integrated database retrieval system
