Castanea sativa (European chestnut): 142630854
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Entry
142630854 CDS
T11266
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
142630854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142630854
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
142630854
FA (Fanconi anemia) pathway
142630854
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GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
142630854
NCBI-ProteinID:
XP_075661022
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Position
4:complement(49797147..49803958)
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AA seq
595 aa
AA seq
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MSRRRLRLVCSSSDEEEQENQIPQQPESENPNPNPNQVPDPYPSEPLEISDDAEEEEEFI
DVSENFTPPDPNPNPNSAGEGSGFREADVSDDSARTNPTAGGGGEHESSGAGSPIGDFLG
RLGLRLKNEWLEACLDALRSSVPSFASLGVDAKAKLCFERFLVSDMNRSGSGVLPRNVDS
MHLVDLPGPFVLQIDEIVNISCPLKGRYQKAPPGIKRCLKLSMTDGVQRVFGMEYRPIQA
LESLAPAGLKVAICNVHIRHGLLMLVPEAFEVLGGLVEELEAARLRLVDEINKPPRGKRT
RSGVVPPLATRATLAAWPSNGVSAAVHNNSSTLQDATPFRANNQGATSVPSGNNTSQRTT
EEFTAPATVENAVPNTSSSVISGFGEMHIDTFPFSRANAVPYPSSHTVSEVEDVHMVDEA
DHPVILSGDREIPFTYLASLSAKLVAVMEKSPSVQGKIKCFLTGVKGFQYKQRTTYELRA
YVDDGSLITEILIHHDVVQKGIGFSPEEVTAALSSLDNKIVSDMKETLKKFQIFLANFEG
TMLIEMSTTSPQPIALEMNEGCTGSDAWLLLRRLNSTVPAQTPHCSSLDPIDVSP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaagacgcctcagactagtctgttcctcctccgacgaagaagaacaagaaaac
caaattcctcaacaacccgaatccgaaaacccgaacccgaacccgaatcaagttccggat
ccctacccatccgaaccgcttgaaatctccgacgacgcagaagaagaagaagaattcatc
gacgtctccgaaaacttcactcctcctgatccgaatccgaatccaaattccgccggtgaa
ggctcgggtttccgggaggctgatgtttccgacgactccgcgcgaacaaatccgaccgcc
ggaggaggaggtgaacacgagagctcgggcgctggttctccgatcggggattttctcggg
aggttagggctgaggctgaagaatgagtggctcgaggcttgcttggacgcgcttcgaagc
tccgtgccgagcttcgcgagcctcggcgtcgacgcgaaggccaagctttgcttcgagcgg
ttcttggtttccgatatgaatcgatccgggagcggtgtgctccctcgcaacgtggattcc
atgcacctcgtcgatcttcctggtccgttcgtcttgcagattgatgagatagttaatatc
agttgtcctctcaagggaaggtatcagaaagcgcctcccgggattaagaggtgtctcaag
ttatcgatgaccgatggtgttcaacgtgtttttggaatggaatacaggcctattcaagcg
cttgaatctttggctcctgctggattgaaggttgccatctgtaatgtacatatacgtcat
gggcttctaatgctggtccctgaagcttttgaagttctagggggattggttgaggagttg
gaggcagcacgcctgcgacttgttgacgaaataaataagccacctaggggaaaaagaaca
aggtcaggagtcgtccctcctttagcaactagagcaacccttgctgcatggccatcaaat
ggtgttagtgctgccgtgcacaacaatagttccacattgcaagatgcaactccctttcga
gcaaataaccaaggtgctacttcggttccgtctggcaataacaccagccaaaggacgaca
gaagaatttacagctcctgcaactgtagaaaatgctgttcctaacacatcatcttctgtt
atttcgggttttggggagatgcatatagatactttcccctttagccgggcaaatgctgtt
ccttatccatcctctcatactgtttcagaggttgaggatgttcatatggttgatgaggca
gaccaccccgtcattctatctggtgaccgggaaatcccatttacttacttagctagtttg
tcagccaagttggtagcagtaatggagaaatcgccctctgttcagggaaaaattaagtgc
tttttgactggcgtaaagggattccaatataagcagcggacaacatatgagctccgggca
tatgttgatgatggtagcctgattactgagatcctcattcatcatgatgttgtacagaaa
gggataggtttttcaccagaggaggtcactgccgctctttcttctctggacaataaaata
gttagtgatatgaaggagacgctcaaaaaattccagatattcttagcgaattttgagggc
acaatgcttatagagatgagtacaacgtctcctcaaccgattgctcttgagatgaatgag
ggctgtactggatctgatgcgtggttgcttctgagaagactaaattctactgttcctgct
caaacaccacactgttcttctttagatcccattgatgtatccccttga
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