Castanea sativa (European chestnut): 142631030
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Entry
142631030 CDS
T11266
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142631030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142631030
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
142631030
Prokaryotic type
Archaeal type
TFB
142631030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
Zn_ribbon_8
CorA
Motif
Other DBs
NCBI-GeneID:
142631030
NCBI-ProteinID:
XP_075661203
LinkDB
All DBs
Position
4:complement(39858002..39862834)
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AA seq
312 aa
AA seq
DB search
MADLFCRDCNQLTEVVFDHSAGDTICSECGLVLEAHSIDETSEWRTFANESNDHDPARVG
GPVNPLLSDGGLSTVISKPNGTSSGFLTASLGKWQTRGSNSDRQLIEAFKAIAIMSDRLG
LVTTIKDRASEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEICSVVNGATQ
KEIGRAREFILKHLELELGQSVEMGTIHAVDYMRRFCSNLGMTNQEVKAAQEIVQKSEEL
DIRRSPISIAAAVIYIVTQLSNEKKALKDISLATRVAEGTIKNSYKDLYPHISRLIPSWF
AKEGDLKNLCKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttgttctgccgcgactgcaaccaactgacggaggtggtgtttgaccactcc
gccggagacaccatatgctcggaatgtgggctggtcttggaggctcactccatcgacgag
acctcagagtggcgaaccttcgcgaacgagtccaacgaccacgacccggcccgagttggc
ggcccggtgaacccgctcctctccgacggtgggctctccacggtcatatctaagcccaat
ggcacttcctctggtttcttgaccgcctcgctcggcaagtggcagactcgtggctctaac
tccgataggcaactcatcgaggccttcaaggccattgccattatgtccgataggctggga
ctggttacaaccataaaggatcgagccagtgaaatatataagaaagtagaagatcaaaaa
cctcttagaggacgaaatcaagaagcaattgtggctgcttgcctctacattgcttgccga
caagaaaacaagcctcggactgtgaaagaaatttgttctgttgtcaacggggccacacag
aaagaaattggcagggcaagagagttcattctaaaacacctggagctagagctgggtcaa
tctgtggaaatgggaactatacatgctgtggactatatgagacgtttttgttccaatctt
ggaatgaccaatcaagaagtcaaggctgcccaagaaattgttcagaaatctgaagagctt
gacataaggaggagcccgatatcaattgcagcagctgttatatacattgtaactcaacta
tcaaatgagaaaaaggcactcaaagatatctcacttgctactagagtggctgaaggaaca
atcaagaattcttataaggatctttatcctcatatctcacggctaattcctagctggttt
gccaaggagggtgatctcaagaatctgtgcaagtcctaa
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