Castanea sativa (European chestnut): 142631505
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Entry
142631505 CDS
T11266
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142631505
04121 Ubiquitin system [BR:
csaa04121
]
142631505
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142631505
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142631505
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142631505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
FAR1_N
Zn_ribbon_8
Anti-TRAP
zf-HC5HC2H
zf-HC5HC2H_2
Zf_IFT144_1st
zf-RING_16
HypA
Motif
Other DBs
NCBI-GeneID:
142631505
NCBI-ProteinID:
XP_075661786
LinkDB
All DBs
Position
4
Genome browser
AA seq
425 aa
AA seq
DB search
MSSSGLSGGGGGGGGGGDTATAPQPQLYFCHQCNHTVTITPSPASDLACPTCHGGFLEEL
ENPNPNPHPFFSNPFFYSSSSSSDLPVPGALPLLFSSSSSSSSSSSASPIFNDLSALFGP
HPHPHAGFAPTRSSPSPSPFDDPDAFNPFVFLQNYLQNLGGNVEVVINSGGGDSPFRAGM
GIGGSPNVNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAVQTLPDIKISKDLLASD
SSQCAVCKDSFELGEEAKQMPCKHIYHPDCILPWLELHNSCPVCRYELPTDDPDYEQRTR
GVATARPVSAGADNQAQTETGSTWGAPAGGNIGGSASAATGIASGIQNQTASSGEIPPTP
RTMERRFRISLPFPWPFGRTLGSTAETSNSGSGTGNNSGGNGGEGNSGNRGNNNFQSETR
QEDLD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccggcttaagcggaggaggaggaggaggaggaggaggaggagatacagca
acggcgcctcaacctcaactgtacttctgccaccaatgcaaccatacggtgacaataact
ccttcacctgcctccgatctcgcctgccctacttgccatggtgggtttcttgaagaactg
gaaaaccctaaccctaatcctcatccttttttctcaaatccctttttttattcttcctct
tcttcttccgaccttcctgtaccaggtgcgcttcccctattattctcctcctcttcctcc
tcctcctcctcttcttccgcctcccccatcttcaatgatctctccgccctcttcggaccc
caccctcacccccacgccggttttgctcccactcgctcatctccctctccctctcctttc
gacgaccctgatgctttcaacccctttgttttccttcagaactatctccaaaacctaggc
ggcaacgttgaggtcgtcattaattctggaggcggtgactccccctttcgtgccggtatg
ggtattggcggctcccctaatgtcaatcttggcgactatttcttcggcccgggactcgaa
cagttgatccaacagctggctgagaatgatcctaaccgatacggtacacccccggcatcc
aaatcggctgtccagacattaccggatattaagatttctaaggatttgttggcttcggat
tcatctcagtgtgccgtctgcaaggattccttcgagctcggcgaggaggccaagcagatg
ccatgtaagcacatttaccatcctgattgtattctgccttggttggaattgcataattct
tgtcctgtgtgtcggtatgagttgcccaccgatgatcccgattacgagcagaggactcgt
ggtgttgccactgccaggccggtgtctgcaggtgctgacaatcaggctcagactgagact
ggttcaacttggggtgctccagcaggtgggaatattggtggttctgcttctgctgccact
ggcattgctagtggaattcagaatcagactgcgagctctggagaaatcccaccaacccca
aggactatggagcggagatttaggatctcattgccatttccatggccatttggtaggaca
ttggggtcaactgcagagaccagcaatagtgggagtggcactggcaacaacagcggaggc
aatggtggggaagggaactcgggaaatagagggaataacaacttccaatcagagaccaga
caggaagatcttgattga
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