Castanea sativa (European chestnut): 142631527
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Entry
142631527 CDS
T11266
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142631527
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
142631527
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
142631527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_19
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
142631527
NCBI-ProteinID:
XP_075661808
LinkDB
All DBs
Position
4
Genome browser
AA seq
2087 aa
AA seq
DB search
MLVQLPRLTNSLRNPFDVDQAYLHRKVILENLNKPRNSASTIDESELARKIVYQWEEASF
EVRQAYKQFIVAVVELIDGEVPSEAFREVALTAYRLFGPVEEDNVDRNIAEKKLDLQKLL
GHMVSDANLRRVASLAQNLFRLQPSDHGPPLVSEWHVNGSGDDIEFGADLVFQAPARFLV
DVSLEDGELLGEERTVPSLFHEGWYEHDSSPHYPSASDGGNYNLSWLRDACDRIVGGSTS
LLSRDELAMAICRVLDSDKPGEAIAGDLLDLVGDSAFETVQELVSHRKELVDAIHHGKLV
LKSDKTTSNTQSRMPSYGTQVTVQTESERQIDKLRRKEEKRHRRGTEYGVESDLSAANFS
SLLQASERKSPFDDLIGSGPGPLSLAVTALPQGTVRKHYKGYEEVIIPPLPTAEMKPGEK
LIEIKELDDFAQAAFRGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISILHE
IGQHFKDGYLHKNEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMMVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
SQTMIRIVGLSATLPNYLEVAQFLRVNPEAGLFFFDSSYRPVPLAQQYVGISEQNYLARN
ELLNEICYKKIVDSLRQGHQAMVFVHSRKDTAKTAQKLVELGRKFDDLDLFSNDKHPQFD
LIKREVVKSRNKDLVELFEYGIGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVN
LPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYL
RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGW
DEVIVDPGLSSKQRALVTDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET
YNEMLRRHMNDSEVIEMVAHSSEFENIVVREEEQNELEMMARNSCPLEVKGGPSNKHGKI
SILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWSEMSLLMLEYCKAVD
RQIWPHQHPLRQFDRDISAEITRKLEERGADLDRLHEMQEKDIGALIRYAHGGKLVKQYL
GYFPWIQLSATVSPITRTVLKVDLFITPDFTWKDRFHGAALRWWILVEDSENDHIYHSEL
FNLTKRMARGEPQKLSFTVPIFEPHPPQYYIRAVCDSWLQADAFYTISFHNLALPEGRTS
HTELLDLKPLPVTSLGNSSYEALYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTIS
AELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWKKRLVSQLGKEMVEMTGDYTPDMMAL
LSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISS
QTERAVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEAHIQGYPGKFYCPRM
NSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMPEEAFQM
VLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLAEELFANNKIQVLVCTSTLAWGVNLPAH
LVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLY
EPFPVESSLRERLHDHINAEIVSSTICHKEDAVHYLTWTYLFRRLTVNPAYYGLESTDSE
IISSYLSRLVQNTFEDLEDSGCIKMSDDIVEPMMLGSIASQYYLSYMTVSMFGSNIGPDT
SLEVFLHILSAASEYNELPVRHNEENYNEALSERVRYMVDKNRLDDPHVKANLLFQAHFS
QLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMIMQSLWFDEDS
SFWMLPSMNVDLASSLNKRGISTVQQLLDLPKATFQTVIGNSPASRLNQDLQHFPIVQVR
LKLQRRDTDGAKSPTLTIRLEKINFKRNKSRAFTPRFPKVKVEAWWLVLGNTSTSDLYAL
KRISFSDRLVTHMELPSTLGSLQGMKLILVSDCYLGFEREYSLEDLH
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgttggtccaacttccccgcttgactaactctctgagaaaccccttcgatgtcgatcag
gcctatctccatcggaaagtcatcctcgagaacctcaacaagcctcggaattctgcgagc
acaattgatgaatctgaacttgcacggaaaattgtatatcaatgggaagaagcttctttt
gaagttcgacaagcatataaacagttcattgtggcggtagtggagttgattgatggagaa
gtgccctctgaagcgtttcgtgaggtggcactcactgcttatcgtctttttggtccagtg
gaggaggacaatgttgatagaaatattgctgagaagaagttggacttgcaaaaacttctt
ggtcacatggtttctgatgctaacctgcggagagttgcctctctagctcaaaatcttttt
agattgcagcctagtgaccatgggcctccacttgtttcagagtggcatgtaaatgggagt
ggcgatgatatagaatttggagctgacctcgtttttcaagcacctgctcggtttctggta
gatgtttctttggaggatggggaattattgggtgaggaaaggactgtgccttctttgttt
catgaaggctggtatgaacatgacagctctccacattacccttctgcttctgatggggga
aactataatttgagttggttaagagatgcatgcgaccggatagttgggggaagtacttca
ctgctttcacgcgacgaactggcaatggccatttgccgggtgcttgattcagacaaacct
ggcgaggcgattgctggtgatctgttggatcttgttggggatagtgcattcgagactgtt
caagaacttgtatcgcatcggaaggaacttgttgatgctatccatcatggtaagcttgta
ctgaaatctgacaaaacgacttcgaatacgcaatcacgaatgccgagttatggtactcag
gttacagttcaaacagaatctgaaaggcaaattgataaacttcggcgcaaggaggaaaaa
aggcatagacgaggaacagaatatggggttgagagtgacttgtctgctgcaaatttttct
tctttacttcaagcaagtgaaaggaaaagtccatttgatgatctgattggatctggccca
ggacccctctcacttgcagttactgctcttcctcaaggaactgtcaggaagcattataag
ggctatgaggaggtcatcatccccccattgccaactgcagaaatgaaacctggagagaaa
ctgattgagataaaggaattagatgacttcgcacaagctgcttttcgtggctacaaatct
ctgaaccgcatccagagccggatatttcaaacagtttattacactaatgagaatatacta
gtttgtgctccaacaggagctggcaaaacaaatattgctatgatttccattctacatgag
attggtcagcacttcaaggatggttacttgcataaaaatgagtttaagatagtttatgtt
gctcctatgaaggcattagctgcagaggtcacttcaacatttagtcaccgtttatctcca
ctgaacatgactgtgagagaacttactggagacatgcaactttcaaagaatgaacttgaa
gaaactcagatgatagtgacaacacctgaaaagtgggatgtcattacgcgcaagagtagt
gacatgtcactttcaatgatggtgaagctcttaattatcgatgaagtgcatctcttgaat
gatgatagaggccctgtaatagaggcacttgttgctcggaccctccgtcaggtggagtca
tcacaaacaatgatacgtattgtggggctttcagccaccctaccaaattatttggaggtg
gcacaatttctgagagtgaatccagaggcgggactcttcttctttgattctagttatcgt
cctgttcctcttgctcaacaatatgttggaattagtgagcagaactatttagctcgcaat
gaattgctgaatgagatttgctataaaaagattgttgattcattaaggcaaggtcatcag
gcaatggtgtttgttcattcacgcaaggacacagcaaaaacagctcagaaattggttgaa
cttggccgaaaatttgatgatcttgatctctttagcaatgataaacatccacagtttgac
ttaatcaagagggaagtagttaagtctagaaacaaagatcttgttgaactttttgaatat
ggaatcggtgttcatcatgctgggatgctacgtgctgatagaggtttgactgagcggctt
ttctctgatggactcttgaaggtacttgtttgtacagcaactttggcatggggtgtaaat
ttgcctgctcacactgttgtgataaaggggacacaattatatgatccgaaggctggtggg
tggcgagatctaggcatgcttgatgttatgcagatctttggacgggctggtagacctcag
tttgacaaaagtggtgaaggcatcatcatcacatcccatgacaaactagcctactatttg
cggttgctgacgagtcaactccccattgaaagccagtttattagctccctgaaagataat
ttaaatgcggaagtagctttgggtacagtcactaatgttaaggaagcttgtgcatggctt
ggatatacatatctttttataaggatgaggttgaatccgttggcatatggtatcggatgg
gatgaggttattgtagatcctggtttaagttcaaagcaaagagctcttgtaacagatgct
gcgcggtcacttgacaaagcaaaaatgatgcggtttgatgagaaaagtggcaatttttac
tgtacagagcttggtcgcattgcaagccacttctatattcagtattctagtgttgaaact
tacaatgaaatgttgagacgccacatgaatgatagcgaggtaattgaaatggttgcccat
tcctctgaatttgaaaatattgttgttcgtgaagaggaacagaatgagttagagatgatg
gcacgcaattcatgtccgttggaagttaagggtggtccttcaaataaacatggaaaaatt
tccattcttattcagttgtacatatctcgaggctcgattgataccttttcattggtttct
gatgctgcatatataagtgctagtttggctcgtattatgagggctttattcgaaatttgt
ttgcgcagaggctggtccgagatgtctttgttaatgttggaatattgcaaggctgtggat
cggcaaatttggccccatcaacatccacttagacaatttgatagggatatttcagcagaa
ataacgcgaaagcttgaagaacgaggggctgatttagatcgcctgcatgagatgcaggaa
aaggatattggagcactgattcgttatgcacatggaggaaagttggttaagcaatattta
ggatattttccatggatccagttatcagcaactgtaagtccaatcaccagaactgttctc
aaggtggatctgttcataacgccagactttacatggaaagatcgttttcatggtgctgct
ttgcgttggtggattctagttgaggattcagagaatgaccatatctaccactctgaactt
ttcaatctgacaaagcggatggctagaggggaacctcagaagctttccttcactgtgccg
atatttgaaccacatccaccccaatactacattcgtgctgtttgtgattcttggttgcag
gcagacgctttctataccatttctttccataatttagcactgccagagggtcgtacttca
cacacagaacttctagatttaaaacctcttccagtgacttcactgggtaacagttcttat
gaagccttgtacaaattttcacattttaatcctatacaaacgcagacttttcatgtcctg
tatcacacagacaataatgtccttttaggagctcccactggaagtgggaaaaccatatct
gctgagcttgctatgcttcgcctctttaatactcagcctgatatgaaggttatttatata
gcaccattgaaggctattgttcgggaaagaatgaatgattggaaaaagcgtcttgtctct
cagcttggaaaggagatggttgaaatgactggagattatactccagatatgatggccctc
ttgtcagctgatatcataatatctactcctgagaagtgggatggtatcagtcgtaattgg
catagtcgaagctatgtcacaaaggttggtcttatgattttggatgagattcacttactg
ggagctgatcgtggtcctatccttgaggttattgtttcaaggatgagatatatatcctca
caaacagagcgcgcagtacggtttgtaggcctttcgacagctttagcaaatgcaggtgat
ttggctgattggttgggtgttggggaaatcggcctcttcaatttcaagccaagtgtgagg
cctgtacctcttgaagctcatatccagggttatcctggaaagttttactgcccgaggatg
aatagcatgaataaacccacatatgctgcaatatgcacccattcacctacaaaaccagtt
cttatatttgtttcatctcgtcgccaaacaaggcttactgctctggacctcattcagttt
gcagcttcagatgagcatccaaggcagtttcttaatatgccagaagaagcatttcaaatg
gttctatctcaggtcactgatcagaacctgaggcacacattacaatttggcattgggttg
caccatgctggtttgaatgacaaggatagatctctggcagaggaactttttgcaaacaac
aagatccaggtattggtttgtaccagcacattggcgtggggtgtgaaccttccagcacat
ctggtcattatcaagggaacagaatattatgatggaaaagcaaagagatatgttgatttt
ccaatcacagatatcttgcaaatgatgggtcgtgctggccgcccacaatttgatcaacat
gggaaagcagtaattcttgttcatgaacccaaaaagagcttctataaaaagtttttgtat
gaaccatttccggttgagagtagtctcagagagcggttgcatgatcacatcaatgcagag
atagtttccagcacaatttgccataaggaggatgcagtgcattaccttacctggacttac
ttattccgtagactgacggttaatcctgcttactatggcttggagagtacagattctgaa
attataagttcttatttatctcggttagtgcaaaacacatttgaggatctggaagacagt
ggatgcatcaagatgagtgatgacattgtggagcctatgatgttgggctcaatagcttct
cagtattacctcagctacatgactgtttctatgtttggttcaaatattggtccagacacg
tcgcttgaagtgtttctgcatatactttctgctgcttctgagtacaatgaacttcctgtg
cggcataatgaggaaaattacaatgaagcattgtctgagagagttcgatatatggtggat
aagaatcgccttgatgatccacatgtcaaagcaaatctgctatttcaggcacatttttct
cagttagaattaccaatcagcgactatgtcacagatttaaagtcagtgttggatcaaagt
atacgtatcatccaggccatgatagatatatgtgcaaacagtggatggctatcaagctca
attacttgcatgcgtcttttacaaatgatcatgcagagtttatggtttgatgaggattcc
agtttttggatgttgccatccatgaatgttgatcttgcaagctcattaaacaaaagagga
atttccaccgtgcagcaactgttggatcttccaaaggctactttccagactgtgattgga
aattctcctgcttcaagattgaatcaggatttgcagcattttcccattgttcaagtgaga
ttaaaacttcagagaagggacactgatggtgcaaaatcccccactctaaccatcagattg
gagaagatcaatttcaaacggaacaaatcaagagcttttaccccccggtttcccaaggtt
aaagttgaagcatggtggttggttcttggtaacacctccacctctgatttatatgctctg
aaaaggatttctttctctgatcgcttagtcacccacatggagttaccatcaaccctgggc
agtctccagggtatgaaattgattttagtttcagattgttatcttggttttgaacgagaa
tactccctcgaagatcttcattga
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integrated database retrieval system
